Pairwise Alignments

Query, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 260 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  130 bits (327), Expect = 3e-35
 Identities = 77/243 (31%), Positives = 134/243 (55%), Gaps = 14/243 (5%)

Query: 9   LLFLVISLFLLLFVLLPLLNMILNPGNVAGAFNDSEVIKSLLVSIKAAGTATVLAIFLGI 68
           LLFL IS  +L+     +L+ I NP          E+I SL VS+ ++  +T + +   I
Sbjct: 20  LLFLSISSLILVPKFEDVLSSIFNP----------EMIYSLKVSLYSSLISTGIVLGFSI 69

Query: 69  PLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGTSIGRGIEDIGFEIVDNF 128
           P  Y ++RY F GK++V+AI+D+P+A P  V+G+ +L  F  T IG  +E  G ++V   
Sbjct: 70  PTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFGQTFIGDILEFFGIKVVFTK 129

Query: 129 WGIVVVMLYVGLPYMVNSGRDGFLMVEEELENVSRTLGASKIKTFFNISLPLIKNNLVSG 188
            GIVV  ++  LPY +      F  +    E VSR+LG S+ +TF N++LP+ ++ + + 
Sbjct: 130 LGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVTLPMARSGIFAS 189

Query: 189 SILTFARGISEVGAILIVA----YFPKTTPVLILDRFNEYGLSSSKPISVIMIVLSIILF 244
           SI+ FAR +   G +L++A     + +T P+ +    +   L  +    ++++++S I  
Sbjct: 190 SIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAISSGIVLLMISFIAI 249

Query: 245 SVF 247
            +F
Sbjct: 250 LIF 252