Pairwise Alignments

Query, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 283 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 67/257 (26%), Positives = 134/257 (52%), Gaps = 13/257 (5%)

Query: 7   FNLLFLVISLFLLLFVLLPLLNMILNPGNVAG------AFNDSEVIKSLLVSIKAAGTAT 60
           ++L+ L +S FL LF++LPL  ++L     AG      A  D + + ++ +++       
Sbjct: 20  WSLIGLALS-FLALFLVLPLA-VVLYGAFEAGINVWWQAITDPDALAAIRLTLLVLIIVV 77

Query: 61  VLAIFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGTS-IGRGIED 119
                 G+ +++ +A++ F GK ++ +IID+P AI   V+G++ +  F      G  +  
Sbjct: 78  PTNAIFGVAIAWAIAKFEFRGKTLLISIIDMPFAISPVVVGLIFVILFGAQGWFGPWLAA 137

Query: 120 IGFEIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVEEELENVSRTLGASKIKTFFNISLP 179
              +++    GI++V+++  LP++            ++ E  S TLGA+ +KTF+ ++LP
Sbjct: 138 HDLKVIFAVPGIIIVIMFGTLPFVARELIPLMQQQGKDEEEASLTLGANGLKTFWYVTLP 197

Query: 180 LIKNNLVSGSILTFARGISEVGAILIVA----YFPKTTPVLILDRFNEYGLSSSKPISVI 235
            IK  L+ G IL  AR + E GA+ +V+        T P+ I   +NEY  +++  +S +
Sbjct: 198 NIKWGLLYGVILCNARAMGEFGAVAVVSGRIRGETNTMPLHIEVLYNEYMFTAAFAVSSL 257

Query: 236 MIVLSIILFSVFRLVRY 252
           +  L+++   +  +V +
Sbjct: 258 LTGLALVTIVLKSMVEW 274