Pairwise Alignments

Query, 255 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 245 a.a., molybdenum ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 96.7 bits (239), Expect = 4e-25
 Identities = 61/199 (30%), Positives = 109/199 (54%), Gaps = 3/199 (1%)

Query: 48  SLLVSIKAAGTATVLAIFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAF 107
           +LL+S+K +  A + ++ LGI  ++LLAR  F GK + ++I+ +P+ +P  V+G ++L  
Sbjct: 24  ALLLSLKVSTLAVIASLPLGILCAWLLARVEFPGKAIFDSILHLPLVLPPVVVGYLLLIS 83

Query: 108 FYGTSI-GRGIED-IGFEIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVEEELENVSRTL 165
                I G+ + +  G     ++ G  +    V  P MV + R  F  V+  LE  +RTL
Sbjct: 84  MGRQGIIGQWLYNWFGLSFSFSWRGAALAAAVVSFPLMVRAIRQSFETVDIRLEQAARTL 143

Query: 166 GASKIKTFFNISLPLIKNNLVSGSILTFARGISEVGA-ILIVAYFPKTTPVLILDRFNEY 224
           G+S+ + F  I+LPL    +VSG I+ FAR + E G+ I  V+  P  T  + L  ++  
Sbjct: 144 GSSRWRVFLTITLPLTSPGIVSGMIIAFARSLGEFGSTITFVSNIPGETRTIPLAMYSFI 203

Query: 225 GLSSSKPISVIMIVLSIIL 243
               ++  ++ + V+SI++
Sbjct: 204 ETPGAEYQAMRLCVISIVI 222