Pairwise Alignments

Query, 312 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis JJ

 Score =  198 bits (504), Expect = 1e-55
 Identities = 115/321 (35%), Positives = 180/321 (56%), Gaps = 22/321 (6%)

Query: 2   LKLENLCKSWKEFQ-LKSVNLEIENNYCILLGPSGAGKSVIIQCITGILKPDSGKIYFNG 60
           L+LEN+ K+++E   L   + E       L+G SG GK+  ++ I G  KPD+GKI+ NG
Sbjct: 3   LRLENISKNFEEHGVLTDTDFECGEELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLNG 62

Query: 61  EDITEMPPEKRNFGYVPQNYALFPNMNVYNNIAYGMKLRKYSKAEIEKKVMEISEFLHIS 120
           EDIT +PP KRN G V QNYALFP++NV+ NIAYG++L+K+SK++I +KV    + +++ 
Sbjct: 63  EDITNIPPNKRNIGLVFQNYALFPHLNVFENIAYGLRLKKFSKSDISEKVKNSIDLVNLG 122

Query: 121 HILDRKPTTLSGGEQQRVAIARALVLDPKILLLDEPTSALDTNIKESVISELKKIGE--L 178
                  + LSGG QQRVAIARA+V++PK +LLDEP S LD  ++  +  ELK++     
Sbjct: 123 GYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNFE 182

Query: 179 VPVIHITHDFVEAKTLGNQIAILINGELNDFGN-QGIFKTPKNEKIANFLGY-------- 229
           +P I++THD  EA  + +++A++  G++  FG+   I+  PK E +A F+G         
Sbjct: 183 IPTIYVTHDQEEALAISDKVAVMNKGKIEQFGDPYSIYSNPKTEFVAKFIGIINELPSSI 242

Query: 230 ---NIISNNEETFAVAPEEIVVKKSLNDENDENIMGTVESLVDFGYYKKLTVNIGDTAVK 286
                I + ++ + V PE I + K        N  G +      G   +  +  GD+   
Sbjct: 243 LNKLDIESGDKKYFVRPESIELGKG-------NFNGKLVDYEFLGSVVRYIIKCGDSLFT 295

Query: 287 TITDGENPVNIGDTVSIMYQR 307
             T+      IG  +   + +
Sbjct: 296 IQTNKPVDFKIGTEILFEFDK 316