Pairwise Alignments

Query, 312 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 378 a.a., polyamine ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  174 bits (442), Expect = 2e-48
 Identities = 102/255 (40%), Positives = 161/255 (63%), Gaps = 8/255 (3%)

Query: 1   MLKLENLCKSWKEFQ-LKSVNLEIENNYCI-LLGPSGAGKSVIIQCITGILKPDSGKIYF 58
           +LK+E + K + + + +  V+L I       LLG SG+GKS +++ + G  +P SG+IY 
Sbjct: 20  LLKIERVSKLFDDVRAVDDVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTSGRIYL 79

Query: 59  NGEDITEMPPEKRNFGYVPQNYALFPNMNVYNNIAYGMKLRKYSKAEIEKKVMEISEFLH 118
           +GEDIT++PP +R    + Q+YALFP+M V  NIA+G+K  K  KAEIE++V E+ + +H
Sbjct: 80  DGEDITDLPPYERPINMMFQSYALFPHMTVAQNIAFGLKQDKLPKAEIEQRVQEMLKLVH 139

Query: 119 ISHILDRKPTTLSGGEQQRVAIARALVLDPKILLLDEPTSALDTNIKESVISELKKIGEL 178
           +     RKP  LSGG++QRVA+AR+L   PK+LLLDEP  ALD  ++  +  E+ +I E 
Sbjct: 140 MEQYGKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLEVVEILER 199

Query: 179 VPV--IHITHDFVEAKTLGNQIAILINGELNDFGN-QGIFKTPKNEKIANFLG-YNIISN 234
           V V  + +THD  EA T+  +I+I+ +G +   G+   I+++P +  IA F+G  N+ S 
Sbjct: 200 VGVTCVMVTHDQEEAMTMAGRISIMSDGWIAQTGSPMDIYESPNSRMIAEFIGSVNLFSG 259

Query: 235 NEETFAVAPEEIVVK 249
             E   V  + +++K
Sbjct: 260 EIEVDEV--DHLIIK 272