Pairwise Alignments

Query, 312 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 366 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  168 bits (425), Expect = 2e-46
 Identities = 90/219 (41%), Positives = 142/219 (64%), Gaps = 4/219 (1%)

Query: 16  LKSVNLEIE-NNYCILLGPSGAGKSVIIQCITGILKPDSGKIYFNGEDITEMPPEKRNFG 74
           L+ V+L I    Y +LLGPSG GK+ +++ I G  +P  G++  +G D++ +PP+KR   
Sbjct: 24  LRQVDLTIAAGEYFVLLGPSGGGKTTLLRTIGGFHRPTEGQVLLHGRDMSHLPPDKRPTT 83

Query: 75  YVPQNYALFPNMNVYNNIAYGMKLRKYSKAEIEKKVMEISEFLHISHILDRKPTTLSGGE 134
            V Q YALFP+M V  N++YG+K+    KA  ++K   + + + ++   +RKP  LSGG+
Sbjct: 84  MVFQAYALFPHMTVLQNVSYGLKVAGMDKATAQEKAAAMMDVVGLAGFAERKPHELSGGQ 143

Query: 135 QQRVAIARALVLDPKILLLDEPTSALDTNIKESVISELKKIGELVPV--IHITHDFVEAK 192
           QQRV +ARALVLD  ILLLDEP +ALD  +++ +  ELK + E V +  IH+TH+  EA 
Sbjct: 144 QQRVQLARALVLDRDILLLDEPLAALDAQLRKDMCLELKHLQEKVGITFIHVTHNQEEAM 203

Query: 193 TLGNQIAILINGELNDFG-NQGIFKTPKNEKIANFLGYN 230
           T+ ++IA++ +G+L + G  + I++ P  +  A F+G N
Sbjct: 204 TVADRIALVADGQLVEQGAARDIYRAPIKKFTAGFVGEN 242