Pairwise Alignments

Query, 312 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 378 a.a., spermidine/putrescine ABC transporter ATPase subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  172 bits (435), Expect = 1e-47
 Identities = 96/233 (41%), Positives = 151/233 (64%), Gaps = 5/233 (2%)

Query: 1   MLKLENLCKSWKEFQ-LKSVNLEIENNYCI-LLGPSGAGKSVIIQCITGILKPDSGKIYF 58
           +LK+E + K + + + +  V+L I       LLG SG+GKS +++ + G  +P SG+I+ 
Sbjct: 20  LLKIERVSKLFDDVRAVDDVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTSGRIFL 79

Query: 59  NGEDITEMPPEKRNFGYVPQNYALFPNMNVYNNIAYGMKLRKYSKAEIEKKVMEISEFLH 118
           +GEDIT++PP +R    + Q+YALFP+M V  NIA+G+K  K  KAEIE++V E+ + +H
Sbjct: 80  DGEDITDLPPYERPINMMFQSYALFPHMTVAQNIAFGLKQDKLPKAEIEQRVQEMLKLVH 139

Query: 119 ISHILDRKPTTLSGGEQQRVAIARALVLDPKILLLDEPTSALDTNIKESVISELKKIGEL 178
           +     RKP  LSGG++QRVA+AR+L   PK+LLLDEP  ALD  ++  +  E+ +I E 
Sbjct: 140 MEQYGKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLEVVEILER 199

Query: 179 VPV--IHITHDFVEAKTLGNQIAILINGELNDFGN-QGIFKTPKNEKIANFLG 228
           V V  + +THD  EA T+  +I+I+ +G +   G+   I+++P +  IA F+G
Sbjct: 200 VGVTCVMVTHDQEEAMTMAGRISIMSDGWIAQTGSPMDIYESPNSRMIAEFIG 252