Pairwise Alignments

Query, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

Subject, 544 a.a., chaperonin GroEL from Synechococcus elongatus PCC 7942

 Score =  106 bits (265), Expect = 2e-27
 Identities = 139/544 (25%), Positives = 236/544 (43%), Gaps = 65/544 (11%)

Query: 30  IIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMS----VEHPAAKMLIEVAKTQ 85
           I+AE V  TLGPKG + +L    G   + NDGVTI +E+     +E+    ++ + A   
Sbjct: 21  ILAEAVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKT 80

Query: 86  EKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQ 145
               GDGTTTA V+A  ++++    +    +  ++ +G   A     E +K+ A  V  +
Sbjct: 81  NDAAGDGTTTATVLAHAVVKEGLRNVAAGANAILLKRGIDKATNFLVEQIKSHARPV--E 138

Query: 146 DKEILTKIAMTSI-----TGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSG 200
           D + + ++   S       G+    A +K+ +   E V ++  +EGK      ++E   G
Sbjct: 139 DSKSIAQVGAISAGNDFEVGQMIADAMDKVGK---EGVISL--EEGK--SMTTELEVTEG 191

Query: 201 ASIDDTELIKGVLVDKERVSAQMPKK---VTDAKIALLNCAIEIKETETDAEIRITDPAK 257
              D   +      D ER+ A   +    +TD KI L+   + + E    A   +     
Sbjct: 192 MRFDKGYISPYFATDTERMEAVFDEPFILITDKKIGLVQDLVPVLEQVARAGRPL---VI 248

Query: 258 LMEFIEQEE------KMLKDM--VAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRV 309
           + E IE+E         L+ +  VA +KA G      +  ++D+A   L    ++     
Sbjct: 249 IAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDR-RKAMLEDIA--VLTGGQLITEDAG 305

Query: 310 KKSDMEKLAKATGANVITNIKDLS--AQDLGDAGL----------VEERKISGDSMIFVE 357
            K D  KL +   A  IT  KD +    +  +A +          +EE + S D     E
Sbjct: 306 LKLDTTKLDQLGKARRITITKDNTTIVAEGNEAAVKARVDQIRRQIEETESSYDKEKLQE 365

Query: 358 ECKHPKAVTMLIR--GTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKL 415
                     +++    TE  +++    ++DA+      +E+G IV GGG+T   L+ +L
Sbjct: 366 RLAKLSGGVAVVKVGAATETEMKDRKLRLEDAINATKAAVEEG-IVPGGGTTLAHLAPQL 424

Query: 416 REYA-EGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAG-- 472
            E+A   +SG E    +  A AL    + +AENAGL+   I  +V+      G   +   
Sbjct: 425 EEWATANLSGEELTGAQIVARALTAPLKRIAENAGLNGAVISERVKELPFDEGYDASNNQ 484

Query: 473 -LNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIA--AEKLRGAPDMGD 529
            +N+FT         G+V+P +V   A+Q+AA    M+L  + ++    E    AP  G 
Sbjct: 485 FVNMFTA--------GIVDPAKVTRSALQNAASIAAMVLTTECIVVDKPEPKEKAP-AGA 535

Query: 530 MGGM 533
            GGM
Sbjct: 536 GGGM 539