Pairwise Alignments

Query, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

Subject, 542 a.a., chaperonin GroEL from Sinorhizobium meliloti 1021

 Score =  116 bits (291), Expect = 2e-30
 Identities = 141/550 (25%), Positives = 242/550 (44%), Gaps = 55/550 (10%)

Query: 19  DAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----EHPA 74
           DA+   +    I+A  VR TLGPKG + ++    G   +T DGV++ +E+ +    E+  
Sbjct: 11  DARDRMLRGVDIMANAVRVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMG 70

Query: 75  AKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134
           A+ML EVA       GDGTTTA V+A  ++R+  + +   ++P  + +G   A +   + 
Sbjct: 71  AQMLREVASRTSDIAGDGTTTATVLAQAIVREGAKAVASGMNPMDLKRGIDLAVEAIVKE 130

Query: 135 LKTIACEVGAQ-------------DKEILTKI--AMTSITGKGAEKAKE-KLAEIIVEAV 178
           L+  A +V                D EI   +  AM  +  +G    +E K AEI +E V
Sbjct: 131 LRNNARKVSKNAEIAQVATISANGDAEIGRYLAEAMEKVGNEGVITVEEAKTAEIELEVV 190

Query: 179 SAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKE--RVSAQMP--KKVTDAKIAL 234
             +  D G +    I  ++K    ++D  ++   L +K+   + A +P  + V  +   L
Sbjct: 191 EGMEFDRGYLSPYFITNQEKMRVELEDAYIL---LHEKKLSNLQAMIPILESVIQSGKPL 247

Query: 235 LNCAIEIKETETDAEIRITD--------PAKLMEFIEQEEKMLKDMVAEIKASGANVLFC 286
           L  A ++ E E  A + +            K   F ++ + ML+D+      +G  V+  
Sbjct: 248 LIIAEDV-EGEALATLVVNKLRGGLKIAAVKAPGFGDRRKSMLEDIAI---LTGGTVISE 303

Query: 287 QKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEER 346
           + GI          + +  A+R+   D E      GA    + +D+  +       +E+ 
Sbjct: 304 ELGI---KLENTTMDTLGRAKRI-MVDKETTTIVDGAG---SKEDIGGRVAQIKAQIEDT 356

Query: 347 KISGDSMIFVEECKHPKAVTMLIR--GTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGG 404
               D     E          +IR  G+TE  ++E    VDDA+      +E+G I+ GG
Sbjct: 357 TSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEG-ILPGG 415

Query: 405 GSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHA 464
           G   + +   L   A   +  +++ +     A+E   R +AENAG +   I+ K+R    
Sbjct: 416 GVALLRVVSALNGLATA-NDDQRVGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLR---- 470

Query: 465 SNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAE-KLRG 523
              +   G N  TG   D+ + GV++P +V   A+Q AA    +L+  + +IA + K  G
Sbjct: 471 EKQDFAFGWNAQTGEFGDLFQMGVIDPAKVVRAALQDAASIAGLLVTTEAMIAEKPKKDG 530

Query: 524 APDMGDMGGM 533
            P M   GGM
Sbjct: 531 QPQMPPGGGM 540