Pairwise Alignments

Query, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

Subject, 543 a.a., Chaperonin Cpn60/TCP-1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  112 bits (280), Expect = 4e-29
 Identities = 131/549 (23%), Positives = 233/549 (42%), Gaps = 76/549 (13%)

Query: 31  IAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----EHPAAKMLIEVAKTQE 86
           +A  V+ TLGPKG + ++    G   +T DGV++ +E+ +    E+  A+ML EVA    
Sbjct: 23  LANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELKDKFENMGAQMLREVASKSA 82

Query: 87  KEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQD 146
              GDGTTTA V+A  ++R+  + +   ++P  + +G   A     + +KT + ++   D
Sbjct: 83  DVAGDGTTTATVLAQAIVREGSKAVAAGMNPMDLKRGIDLAVAAVVKDVKTRSRKIATND 142

Query: 147 KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT 206
           +  + ++   S  G       E++ +II  A+   V  EG     +I +E+  G    DT
Sbjct: 143 E--IAQVGTISANG------DEEVGKIIARAMDK-VGHEG-----VITVEEAKGL---DT 185

Query: 207 EL--IKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQ 264
           EL  ++G+  D+  +S             L N  I I E +      +     ++E + Q
Sbjct: 186 ELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILIHEKKLSG---LQPLLPVLEAVVQ 242

Query: 265 EEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGAN 324
             + L  +  +++      L   +    L    +   G    R   K+ +E +A  TG  
Sbjct: 243 SGRPLLIIAEDVEGEALATLVVNRLRGGLKVASVKAPGFGDRR---KAMLEDIAILTGGQ 299

Query: 325 VIT---NIKDLSAQDLGDAGLVEERKISGDSMIFVE----------ECKHPKA------- 364
           VI+    IK L    L   G  +   I+ D+   V+           C   +A       
Sbjct: 300 VISEDLGIK-LETVTLDMLGTAKTVTITKDNTTIVDGAGVKADIDARCAQIRATIEDTTS 358

Query: 365 ------------------VTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGS 406
                               + + G +E  ++E    VDDA+      +E+G I++GGG 
Sbjct: 359 DYDREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEG-IIAGGGV 417

Query: 407 TEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASN 466
             +  + K  +     +  +++ +     AL+   R +AENAG+D   +  K+      +
Sbjct: 418 ALLH-AAKALDALSPANADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKL----LES 472

Query: 467 GNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIA--AEKLRGA 524
            +   G N  TG  E++ + GV++P +V   A+Q AA    +L+  + ++A   EK    
Sbjct: 473 SDADFGYNAQTGVYENLVKVGVIDPTKVVRTALQGAASVASLLITTEAMVAEIPEKKPAL 532

Query: 525 PDMGDMGGM 533
           P  G MG M
Sbjct: 533 PAGGGMGDM 541