Pairwise Alignments

Query, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

Subject, 550 a.a., 60 kDa chaperonin from Phaeobacter inhibens DSM 17395

 Score =  141 bits (355), Expect = 7e-38
 Identities = 136/562 (24%), Positives = 244/562 (43%), Gaps = 64/562 (11%)

Query: 19  DAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----EHPA 74
           DA+   +    I+A+ V+ TLGPKG + +L    G   +T DGV++ +E+ +    E+  
Sbjct: 11  DARNRMLNGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELEDKFENMG 70

Query: 75  AKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134
           A+M+ EVA     E GDGTTTA V+A  ++++  + +   ++P  + +G   A  K  E 
Sbjct: 71  AQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGLKQVAAGLNPMDLKRGIDLATAKVVEG 130

Query: 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 194
           +K +A EV    K+      + +I+  G  +  +++A+ + +     V +EG     +I 
Sbjct: 131 IKAMAREV----KDSAEVAQVGTISANGESEIGQQIADAMQK-----VGNEG-----VIT 176

Query: 195 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITD 254
           +E+  G    +T +++G+  D+  +S             L +C I + E +  +   +  
Sbjct: 177 VEENKGLE-TETTVVEGMQFDRGYLSPYFVTNADKMVADLEDCMILLHEKKLSS---LQA 232

Query: 255 PAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQK-------------GIDDLAQHYLAKE 301
              L+E + Q +K L  +  +++      L   K             G  D  +  L   
Sbjct: 233 MVPLLEQVIQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDI 292

Query: 302 GIVAARRVKKSDMEKLAKATGANVITNIKDLS--------AQDLGDAGLVEERKISGDSM 353
            I+   +V   D+    ++   +++   K +             G+   +E R     + 
Sbjct: 293 AILTGGQVISEDLGMKLESVTMDMLGTAKKIEITKDETTIVDGAGEKAEIEARVAQIRAQ 352

Query: 354 IFVEECKHPK-------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRI 400
           I      + +                + + G TE  ++E    VDDA+      +++G I
Sbjct: 353 IEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGVI 412

Query: 401 VSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVR 460
           V GGG   V+   K  E  EG +  +   +     A+E   R +AENAG+D   +  KVR
Sbjct: 413 V-GGGVALVQAG-KALEGLEGANADQNAGIVIVRKAIEAPLRQIAENAGVDGAVVAGKVR 470

Query: 461 AAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEK 520
            +  +N     G N  T    DM   GV++P +V   A++ AA    +L+  + ++A + 
Sbjct: 471 ESSDNN----FGFNAQTEEYGDMFAFGVIDPAKVARTALEDAASVAGLLITTEAMVADKP 526

Query: 521 LRGAPDMGDMGGMPGMGGMPGM 542
            +     G  GGMP MGGM GM
Sbjct: 527 SKDGAGAG--GGMPDMGGMGGM 546