Pairwise Alignments

Query, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

Subject, 549 a.a., chaperonin GroEL (RefSeq) from Shewanella loihica PV-4

 Score =  132 bits (331), Expect = 4e-35
 Identities = 144/577 (24%), Positives = 256/577 (44%), Gaps = 90/577 (15%)

Query: 17  GRDAQRMNILAG-RIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----E 71
           G DA R+ +LAG  ++A  V+ TLGPKG + +L    G  ++T DGV++ +E+ +    E
Sbjct: 9   GNDA-RVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEIELEDKFE 67

Query: 72  HPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKA 131
           +  A+M+ EVA       GDGTTTA V+A  ++ +  + +   ++P  + +G   A   A
Sbjct: 68  NMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGIDKAVVAA 127

Query: 132 QELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKD 191
              LKT++ E    D + + ++      G  +  + E + EII  A+        KV K+
Sbjct: 128 VAELKTLSQE--CSDTKAIAQV------GTISANSDESIGEIIATAME-------KVGKE 172

Query: 192 LIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIR 251
            +   ++  A  ++ ++++G+  D+  +S     K     + L N  I + + +      
Sbjct: 173 GVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELENPYILLVDKKIS---N 229

Query: 252 ITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVK- 310
           I +   ++E + +  K L  +  +++      L                 GIV    VK 
Sbjct: 230 IRELLPILEGLAKTGKPLMIIAEDVEGEALATLVVNN-----------MRGIVKVAAVKA 278

Query: 311 -------KSDMEKLAKATGANVIT-----NIKDLSAQDLGDA--------------GLVE 344
                  K+ ++ +A  TG  VI       ++  + +DLG A              G  E
Sbjct: 279 PGFGDRRKAMLQDIAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGTGE 338

Query: 345 ERKISG----------DSMIFVEECKHPKAVTMLIRG--------TTEHVIEEVARAVDD 386
           + +IS           +S    +  K  + +  L  G         TE  ++E    V+D
Sbjct: 339 QEQISARVAQIKIQAEESTSDYDREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVED 398

Query: 387 AVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAE 446
           A+      +E+G +V+GGG   + ++ K+ E  +  +  ++  V     A+E   R +A 
Sbjct: 399 ALHATRAAVEEG-VVAGGGVALIRVASKIGE-LDVANEDQKHGVTIALRAMEAPLRQIAT 456

Query: 447 NAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAEST 506
           NAG +A      V A +  NG+   G N  +    DM E G+++P +V   A+Q A+   
Sbjct: 457 NAGEEA-----SVVANNVKNGSGNYGYNAGSDVYGDMLEMGILDPTKVTRSALQFASSIA 511

Query: 507 EMLLRIDDVIA-AEKLRGAPDMGDMGGMPGMGGMPGM 542
            +++  + ++    +  GA DMG MGG  GMGGM GM
Sbjct: 512 GLMITTEAMVGDVPQEAGAGDMGGMGG--GMGGMGGM 546