Pairwise Alignments

Query, 543 a.a., TCP-1/cpn60 chaperonin family protein from Methanococcus maripaludis S2

Subject, 545 a.a., chaperonin GroEL (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  131 bits (329), Expect = 8e-35
 Identities = 142/567 (25%), Positives = 253/567 (44%), Gaps = 75/567 (13%)

Query: 17  GRDAQRMNILAG-RIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSV----E 71
           G DA R+ +LAG  I+A  V+ TLGPKG + +L    G  ++T DGV++ +E+ +    E
Sbjct: 9   GNDA-RVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEIELEDKFE 67

Query: 72  HPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKA 131
           +  A+M+ EVA       GDGTTTA V+A  ++ +  + +   ++P  + +G   A   A
Sbjct: 68  NMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGIDKAVIAA 127

Query: 132 QELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKD 191
              LK ++ +    D + + ++      G  +  + E + +II  A+        KV K+
Sbjct: 128 VAELKNLSQD--CADSKAIAQV------GTISANSDESIGQIIATAME-------KVGKE 172

Query: 192 LIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIR 251
            +   ++  A  ++ ++++G+  D+  +S     K     + L +  + +       + +
Sbjct: 173 GVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLL------VDKK 226

Query: 252 ITDPAKLMEFIEQEEKMLKDM--VAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRV 309
           I++  +L+  +E   K  K +  VAE     A        +  + +    K      RR 
Sbjct: 227 ISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRR- 285

Query: 310 KKSDMEKLAKATGANVIT-----NIKDLSAQDLGDA--------------GLVEERKISG 350
            K+ ++ +A  TG  VI       ++  + +DLG A              G  E+ +I  
Sbjct: 286 -KAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEA 344

Query: 351 ----------DSMIFVEECKHPKAVTMLIRG--------TTEHVIEEVARAVDDAVGVVG 392
                     +S    ++ K  + +  L  G         TE  ++E    V+DA+    
Sbjct: 345 RVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATR 404

Query: 393 CTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDA 452
             +E+G +V GGG   + ++ K+ +       ++   V A   A+E   R +A NAG +A
Sbjct: 405 AAVEEG-VVPGGGVALIRVASKIADVEVANEDQKHGVVIALR-AMEAPLRQIATNAGEEA 462

Query: 453 IEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRI 512
                 V A +  NG+   G N       DM E G+++P +V   A+Q AA    +++  
Sbjct: 463 -----SVVANNVKNGSGNYGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITT 517

Query: 513 DDVIAAEKLRGAPDMGDMGGMPGMGGM 539
           + ++A      APDMG MGGM GMGGM
Sbjct: 518 EAMVAELPKADAPDMGGMGGMGGMGGM 544