Pairwise Alignments

Query, 373 a.a., alanine racemase from Methanococcus maripaludis S2

Subject, 358 a.a., alanine racemase, biosynthetic (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  187 bits (474), Expect = 5e-52
 Identities = 128/363 (35%), Positives = 193/363 (53%), Gaps = 19/363 (5%)

Query: 8   AEIDLSAIKNNIKEIRRITNPKSQVMAVVKANAYGHGSVEVSKICLENGADRLAVARSTE 67
           AEI  SA++NN+  +R+  +  SQVMAVVKAN YGHG + V+K CL N AD   +AR  E
Sbjct: 7   AEISSSALQNNLAVLRQQAS-SSQVMAVVKANGYGHGLLNVAK-CLNN-ADGFGLARLEE 63

Query: 68  ALELRDAGITCPILVF-GYVTEEEILKMVENDITLTVYSLEIANSIQKIAEKLGKHSKIH 126
           ALELR   +   +L+  G+    ++  +VE+DI   V+       +++    L K   + 
Sbjct: 64  ALELRAGSVKARLLLLEGFFRSTDLPLLVEHDIDTVVHHESQIEMLEQAT--LSKPVTVW 121

Query: 127 IKVDTGMSRLGFLPEKSSVETIKKIRELENIEVE-GIYTHFADADNSDKTYTTMQFSKFT 185
           +KVD+GM RLG  PE+ S     ++   +N+     + THFA AD  D  YT +Q   F 
Sbjct: 122 LKVDSGMHRLGVTPEQFSA-VYARLTACKNVAKPIHLMTHFACADEPDNHYTQVQMQTFN 180

Query: 186 SFLHDLEENGIDIPIKHASNSAAIIDHPETHLNMVRPGIILYGLYPSELVHKERINLQPA 245
               DL         +  +NSA  +  P++  + +RPGI +YG+ P          L PA
Sbjct: 181 QLTADLPG------FRTLANSAGALYWPKSQGDWIRPGIAMYGVSPVTGDCGANHGLIPA 234

Query: 246 MSLKVLVTHVKDVPENTKISYGCTFETKKQSKIASLPIGYADGFTRMLRNGN-VLIHGLR 304
           M+L   +  V++   N  + YGC +  K+ +++  + IGY DG+ R    G  V I+G R
Sbjct: 235 MNLVSRLIAVREHKANQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNAPEGTPVWINGRR 294

Query: 305 VPVVGRICMDQCMIDVTSIENVNVGDVVTVFGKDGTEKISIEEFGNKLGTINYELVCMVS 364
           VP+VGR+ MD   +D+       VGD V ++G    + + +EE    +GTI YELV  ++
Sbjct: 295 VPIVGRVSMDMLTVDLGHDATDQVGDDVLLWG----QALPVEEVAEHIGTIAYELVTKLT 350

Query: 365 ARV 367
            RV
Sbjct: 351 PRV 353