Pairwise Alignments

Query, 453 a.a., sodium:alanine symporter family protein from Methanococcus maripaludis S2

Subject, 447 a.a., amino acid carrier protein from Pseudomonas stutzeri RCH2

 Score =  436 bits (1122), Expect = e-127
 Identities = 234/449 (52%), Positives = 305/449 (67%), Gaps = 13/449 (2%)

Query: 1   MDFVS-LVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAF-SKHQDETS 58
           M+F++ LVN+VN  VWGP MLVL+LGTG+FL + L FM +  +P    L +  + + + +
Sbjct: 1   MEFLNNLVNSVNGLVWGPPMLVLILGTGLFLMIFLKFMPLTRIPTGFALMWRGRTKGDEA 60

Query: 59  EGDISHFQALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAI 118
            G+IS FQALMT+LAAT+GTGNIAGVATA  LGGPGA+FWMW TA  GMATKY E VLA+
Sbjct: 61  TGEISPFQALMTSLAATVGTGNIAGVATAIFLGGPGALFWMWCTALVGMATKYCEVVLAV 120

Query: 119 KYRTVDDNGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFGAFAAFGIGNMVQTNSVADAV 178
            YR  DD GE  GGPMY ++ GL    +   LG AFA FG  A FGIGNMVQ NS+A A+
Sbjct: 121 HYREKDDRGEHVGGPMYAIKNGLGKKWIW--LGTAFAIFGGLAGFGIGNMVQVNSMAHAL 178

Query: 179 ASNFGVDPLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVILAMNIGYI 238
            + F V    TG V  +    VILGGI+ IG     +VPFM + Y++A  V+L +N+  I
Sbjct: 179 ETTFAVPLWATGLVTMVIVGLVILGGIRRIGVVAASLVPFMCLAYLIAAAVVLVVNVSAI 238

Query: 239 IPAFGTIFSSAFNFSAGFGALIGTAIM----WGVKRGVFSNEAGLGSAPIAAAAAKTDHP 294
             AF  IF+ AF   A  G   G A+M    +GV RG+FSNEAGLG+A IA AA  T   
Sbjct: 239 PAAFDLIFTHAFTPIAATGGFAGAAVMAAIRFGVARGIFSNEAGLGTAGIAQAAGTTTSS 298

Query: 295 GRQALVSMTGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASFDALMP-MGGL 353
            R  ++ M GTF+DTI+VC++TGL +   G+      +  +GA+L+AA+F++ MP +GG+
Sbjct: 299 VRSGMIGMLGTFIDTIIVCSMTGLAIICTGV----WTSGESGAALSAAAFESAMPGIGGI 354

Query: 354 IVTIGLVFFAYSTVLGWSYYGEKCFEYLIGTKGIRLYRIAFVLVAFWGATASLPLVWNIA 413
           I+TI LV FA++T+LGWSY+GEKC+E+L+GT+ I  +R+ +VL   +GA A L   W +A
Sbjct: 355 ILTIALVVFAFTTILGWSYFGEKCWEFLVGTRAIWPFRVIWVLAVPFGAIAQLDFAWLLA 414

Query: 414 DTLNGAMAIPNLIGLLLLSGVVVSETKAF 442
           DTLNG MAIPNLI LLLLS VVV  TK +
Sbjct: 415 DTLNGLMAIPNLISLLLLSPVVVKLTKEY 443