Pairwise Alignments

Query, 453 a.a., sodium:alanine symporter family protein from Methanococcus maripaludis S2

Subject, 459 a.a., amino acid carrier protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  424 bits (1091), Expect = e-123
 Identities = 228/444 (51%), Positives = 292/444 (65%), Gaps = 13/444 (2%)

Query: 6   LVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKH---QDETSEGDI 62
           LV ++NS VWG  MLV++LG G++L+L L  + I  L    +L +S     Q +  +GD+
Sbjct: 7   LVKSLNSLVWGIPMLVMILGVGLYLSLGLKLLPILKLGKGFRLLWSGRTPGQGKEVKGDV 66

Query: 63  SHFQALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKYRT 122
           S F ALMT+L+ATIGTGNIAGVATA  +GGPGA+FWMW TA  GMATKY+EAVLA++YR 
Sbjct: 67  SPFNALMTSLSATIGTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVLAVRYRE 126

Query: 123 VDDNGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFGAFAAFGIGNMVQTNSVADAVASNF 182
           VD+ G   GGPMY+++ GL        LG AFA FG+FA FGIGN VQ NSVA A+ SNF
Sbjct: 127 VDEKGNYIGGPMYYIKNGLGSKWTW--LGTAFALFGSFAGFGIGNTVQANSVASALTSNF 184

Query: 183 GVDPLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVILAMNIGYIIPAF 242
           GV   ++G V+ +    V++GGIK I    G +VP M +FYI AG+ +L +    I  A 
Sbjct: 185 GVPAWVSGVVMMVLVGLVLMGGIKRIAIVAGKLVPLMTIFYITAGIAVLVVYASEIPAAL 244

Query: 243 GTIFSSAFNFSAGFGALIGTAIM----WGVKRGVFSNEAGLGSAPIAAAAAKTDHPGRQA 298
             I SSAF+  A  G   G A+M     GV RGVFSNEAGLGSAPIA AAA+T  P  Q 
Sbjct: 245 SLIISSAFSPVAAQGGFAGAAVMVAIQMGVARGVFSNEAGLGSAPIAHAAAQTKSPVTQG 304

Query: 299 LVSMTGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASFDALMPMGGLIVTIG 358
           LV M GTF+DTI+VC+ITGL + ++G       +   GA+LT+ +F   +P+G  IV + 
Sbjct: 305 LVGMLGTFIDTIIVCSITGLAIVVSG----AWTSGENGAALTSYAFSHALPIGDYIVAVA 360

Query: 359 LVFFAYSTVLGWSYYGEKCFEYLIGTKGIRLYRIAFVLVAFWGATASLPLVWNIADTLNG 418
           L  FA++T+LGWS Y EKC +YL+G K +  +R+ + LV   GA  SL  VW +ADTLN 
Sbjct: 361 LAIFAFTTILGWSVYSEKCVQYLLGVKAVMPFRLIWTLVVPLGAMGSLDFVWLLADTLNA 420

Query: 419 AMAIPNLIGLLLLSGVVVSETKAF 442
            MAIPNLI L LLS VV   T+ F
Sbjct: 421 MMAIPNLIALALLSPVVFKLTREF 444