Pairwise Alignments

Query, 453 a.a., sodium:alanine symporter family protein from Methanococcus maripaludis S2

Subject, 492 a.a., amino acid carrier protein (RefSeq) from Shewanella loihica PV-4

 Score =  291 bits (745), Expect = 3e-83
 Identities = 161/441 (36%), Positives = 244/441 (55%), Gaps = 12/441 (2%)

Query: 5   SLVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKHQDETSEGDISH 64
           S +N VN  +WG  ++ +L+  G+  TLRLGF+Q+    +  KL     Q       IS 
Sbjct: 11  STINAVNGMLWGSVLIYVLVAAGVLFTLRLGFIQLRMFGHGSKLVL---QGREKTNGISS 67

Query: 65  FQALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKYRTVD 124
           FQ   T++AA +GTGN+AGVA A  +GG GA+FWMW+ A  GMAT + E+ LA  Y+  D
Sbjct: 68  FQVFCTSMAARVGTGNMAGVAVAITVGGAGAVFWMWLIALLGMATAFIESTLAQVYKVKD 127

Query: 125 DNGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFGAFAAFGIGNMVQTNSVADAVASNFGV 184
            +G+  GGP Y++E+GL    +G +  V       FA     N  Q N++ DA+ + FG+
Sbjct: 128 SDGQYRGGPAYYMEQGLGKRWMGSLFSVLLIIAFGFAF----NAAQANTMTDALNNAFGL 183

Query: 185 DPLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVILAMNIGYIIPAFGT 244
           D  + G V+    A +I GG+K + KA+ +IVP MAV Y+   L++L MN+  +  A   
Sbjct: 184 DKTMVGLVIVAVAAYIISGGLKKVAKASELIVPVMAVAYLAIALIVLVMNLEQVPAALAY 243

Query: 245 IFSSAFNFSAGFGALIGTAIMWGVKRGVFSNEAGLGSAPIAAAAA--KTDHPGRQALVSM 302
           I  SAF +    G  +G A+M G+ RG+FSNEAG+GSA   AA+A    +HP  Q  V M
Sbjct: 244 IVKSAFGWEEAAGGAMG-AMMAGIARGLFSNEAGMGSAANIAASASPNPNHPASQGFVQM 302

Query: 303 TGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASFDALMPMGGLIVTIGLVFF 362
            G F+DTIV+C+ T  ++ ++G+   PG     G  L  A  + +       V   ++ F
Sbjct: 303 IGVFVDTIVICSATAAIILLSGVLDAPGEQKGIGL-LQLALTNEVGGWAAYFVAFAIILF 361

Query: 363 AYSTVLGWSYYGEKCFEYLIGTKGI-RLYRIAFVLVAFWGATASLPLVWNIADTLNGAMA 421
            +S+++    Y E    +L  +K +  ++R   + +   G+ ASL LVWN AD   G MA
Sbjct: 362 CFSSIIANYSYAESNIMFLSRSKKVLYIFRALVLAMVMAGSVASLQLVWNFADVSMGLMA 421

Query: 422 IPNLIGLLLLSGVVVSETKAF 442
           + N+  +++LS V  +  K +
Sbjct: 422 LVNIAAIVMLSKVAFAVIKDY 442