Pairwise Alignments

Query, 431 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA from Methanococcus maripaludis S2

Subject, 504 a.a., Amidase clustered with urea ABC transporter and nitrile hydratase functions from Pseudomonas fluorescens FW300-N2E2

 Score =  160 bits (404), Expect = 1e-43
 Identities = 118/410 (28%), Positives = 190/410 (46%), Gaps = 29/410 (7%)

Query: 47  LYGKIVAVKSNINVKGYKISCASKTLEKYVGTYDATVVKKLRSQGALIVGMTNMDEFAGG 106
           L GK VA+K NI++ G  +   +  LE +V ++DATVV +L   GA I+G    + +   
Sbjct: 88  LSGKTVALKDNISLAGVPMMNGAAPLEGFVPSFDATVVTRLLDAGATILGKATCEHYCLS 147

Query: 107 SSGETSCYGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHCGIVG 166
               TS   P  NP       GGSSSGSAA VA    D+AIG D GGSIR PA+ CGI G
Sbjct: 148 GGSHTSDPAPVHNPFRHGYTTGGSSSGSAALVATGAVDLAIGGDQGGSIRIPAAWCGIYG 207

Query: 167 FKPSYGVVSRQGLCDLAMSFDQIGPLTKNAEDALVLTNAIKGIDRSDSTSLETPKFE--- 223
            KP++G+V   G+  +  +FD +GP+T N  D  ++   + G D  D      PK +   
Sbjct: 208 MKPTWGLVPYTGVMAIESTFDHVGPMTSNVRDNALMLEVMAGADGLDPRQ-AAPKVDAYC 266

Query: 224 ---KKDISNYKIGVVKEFMDVT--DEKIRNEIEKGIEVFKDMGCKIVDLSYKYIDLA--- 275
              ++ ++  +IGV++E   +   D +I  ++   I   + +G ++ ++S    +LA   
Sbjct: 267 DYLERGVTGLRIGVLQEGFQLANQDPRIAEKVRSAIARLEALGARVEEVSVPEHNLAGSL 326

Query: 276 --------LPTYYLINYVEFFSATRKYD----GRRYGEFIEEACGEEVLRRILIGKHISE 323
                   L    +      F+    YD     ++ G   +       L+  +       
Sbjct: 327 WSPIGCEGLTMQMMHGNGAGFNWKGLYDVGLLDKQAGWRDQANALSPSLKLCMFVGQFGL 386

Query: 324 QEFSGKYYKKALQARKSMKKEMLGLFNSADLIVGPTVPKLPHKL---GEDVSPMEMYAYD 380
           + ++G+YY KA    +  +       ++ DL+V PTVP     L   G  ++     A +
Sbjct: 387 ERYNGRYYAKAQNIARFARAAYDKALDTYDLLVMPTVPITAQPLPEPGSSITETVTRALE 446

Query: 381 VL--TVPTNICGICSGVVRCGNISGVPVGLQIQGAPLEDEKVLSAMIEFE 428
           +L  T   +I G  +  + CG + G+PVGL + G    +  +  A   FE
Sbjct: 447 MLGNTAAQDITGHPAMSIPCGLVDGLPVGLMLVGRHYAEGTLYQAAAAFE 496