Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 230 a.a., NrfC, Fe-S-cluster-containing hydrogenase component 1 (RefSeq) from Shewanella amazonensis SB2B

 Score = 80.5 bits (197), Expect = 1e-20
 Identities = 52/151 (34%), Positives = 70/151 (46%), Gaps = 30/151 (19%)

Query: 10  CVDCKKCERAC------PINAIHV-------FDGIP--------IRCMHCEDAPCLNVCP 48
           C+ C  C +AC      P     V       F   P        + C HCE APC+ VCP
Sbjct: 53  CIGCNACVQACRETNQIPEGVTRVKIERRGPFGEYPNQSYRFSRVSCQHCEAAPCVRVCP 112

Query: 49  EDA--IEKIADKVVVHPEKCVGCALCAEVCPVGAIQIDRGTKVAVKCDGC----IERGSE 102
             A  I+K    V V+ ++CVGC  C   CP     I   T+ A KCD C    + +G +
Sbjct: 113 TGAAYIDKETGIVAVNSDRCVGCQYCIAACPYQVRYIHPETRTADKCDFCQKSRLAQGLQ 172

Query: 103 -VCLEVCPTKALDYYENTIENKRAELVSKLK 132
             C+E CPTKAL +    +++  +ELV  LK
Sbjct: 173 PACVEACPTKALTF--GNLKDPESELVKLLK 201



 Score = 31.2 bits (69), Expect = 1e-05
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 10/60 (16%)

Query: 3   VMPNIDLCVDCKKCERACP--INAIHVFDGIPIRCMHCEDA--------PCLNVCPEDAI 52
           V  N D CV C+ C  ACP  +  IH       +C  C+ +         C+  CP  A+
Sbjct: 125 VAVNSDRCVGCQYCIAACPYQVRYIHPETRTADKCDFCQKSRLAQGLQPACVEACPTKAL 184