Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 212 a.a., 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) from Rhodospirillum rubrum S1H

 Score = 82.0 bits (201), Expect = 5e-21
 Identities = 54/181 (29%), Positives = 73/181 (40%), Gaps = 51/181 (28%)

Query: 3   VMPNIDLCVDCKKCERACPIN-------AIHVFDG---------------IPIRCMHCED 40
           ++ + D C+ C+ CE AC +         +   DG               +P+ C HCED
Sbjct: 28  ILADSDKCIGCRMCEIACAVTHSEDKPETVGALDGPLVPRLFVVVTDDVTVPVICRHCED 87

Query: 41  APCLNVCPEDAIEKIADKVVVHPEKCVGCALCAEVCPVGAIQI----------------- 83
           APC +VC   AI ++  KV+V  E+CVGC LC   CP GA +                  
Sbjct: 88  APCASVCKMAAISRVDGKVLVDAERCVGCRLCLMACPFGATEFVPQPADAAPVYITPADG 147

Query: 84  --DRGTKV---AVKCDGCIE-RGSEVCLEVCPTKALDYYENTIENKR------AELVSKL 131
              R  KV   A KCD C        C+  CP   L   +   E  R       +LVS +
Sbjct: 148 RPSRAVKVRYKANKCDLCSGLADGPACVNACPQNVLSIVDPAAEVARRALGAVEDLVSSM 207

Query: 132 K 132
           K
Sbjct: 208 K 208



 Score = 38.5 bits (88), Expect = 6e-08
 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 14/104 (13%)

Query: 2   KVMPNIDLCVDCKKCERACPINAIHVFDGIPIRCMHCEDAPCLNVCPEDAIEKIADKVVV 61
           KV+ + + CV C+ C  ACP  A    + +P       DA  + + P D     A KV  
Sbjct: 105 KVLVDAERCVGCRLCLMACPFGAT---EFVP----QPADAAPVYITPADGRPSRAVKVRY 157

Query: 62  HPEKCVGCA------LCAEVCPVGAIQI-DRGTKVAVKCDGCIE 98
              KC  C+       C   CP   + I D   +VA +  G +E
Sbjct: 158 KANKCDLCSGLADGPACVNACPQNVLSIVDPAAEVARRALGAVE 201