Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 230 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 82.4 bits (202), Expect = 4e-21
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 32/156 (20%)

Query: 10  CVDCKKCERACPINAIHVFDGIP----------------------IRCMHCEDAPCLNVC 47
           C+ C  C +AC     H+ +G+                       + C HCE APC+ VC
Sbjct: 53  CIGCNACVQACR-EVNHIPEGVTRVKIERKGPFGEYPDQSYRFSRVSCQHCEAAPCVRVC 111

Query: 48  PEDA--IEKIADKVVVHPEKCVGCALCAEVCPVGAIQIDRGTKVAVKCDGC----IERGS 101
           P  A  I+K    V V+ ++CVGC  C   CP     I   T+ A KCD C    + +G 
Sbjct: 112 PTGAAYIDKETGIVAVNSDRCVGCQYCIAACPYQVRYIHPETRTADKCDFCQKSRLAQGL 171

Query: 102 E-VCLEVCPTKALDYYENTIENKRAELVSKLKKLTS 136
           +  C+E CPTKAL +    +++  ++LV  LK+  S
Sbjct: 172 QPACVEACPTKALTF--GNLKDPESDLVKLLKRKPS 205



 Score = 31.2 bits (69), Expect = 1e-05
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 10/60 (16%)

Query: 3   VMPNIDLCVDCKKCERACP--INAIHVFDGIPIRCMHCEDA--------PCLNVCPEDAI 52
           V  N D CV C+ C  ACP  +  IH       +C  C+ +         C+  CP  A+
Sbjct: 125 VAVNSDRCVGCQYCIAACPYQVRYIHPETRTADKCDFCQKSRLAQGLQPACVEACPTKAL 184