Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 205 a.a., anaerobic dimethyl sulfoxide reductase, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 75.5 bits (184), Expect = 4e-19
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 31  IPIRCMHCEDAPCLNVCPEDAI--EKIADKVVVHPEKCVGCALCAEVCPVGAIQIDRGTK 88
           I I C HC +  C+  CP  A+  E+    V V+ + C+GC  CA  CP  A QID   K
Sbjct: 66  ISISCNHCSNPVCVKACPTGAMYKERSTGLVKVNQDLCIGCESCARACPYDAPQIDPQRK 125

Query: 89  VAVKCDGCIERGSE----VCLEVCPTKALDY 115
           V  KCDGC +R ++     C+  CP +ALD+
Sbjct: 126 VMTKCDGCSDRVAKGLKPSCVMSCPQRALDF 156



 Score = 37.0 bits (84), Expect = 2e-07
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 9/60 (15%)

Query: 3   VMPNIDLCVDCKKCERACPINA--IHVFDGIPIRCMHCED-------APCLNVCPEDAIE 53
           V  N DLC+ C+ C RACP +A  I     +  +C  C D         C+  CP+ A++
Sbjct: 96  VKVNQDLCIGCESCARACPYDAPQIDPQRKVMTKCDGCSDRVAKGLKPSCVMSCPQRALD 155