Pairwise Alignments

Query, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 188 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score = 75.9 bits (185), Expect = 3e-19
 Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 33  IRCMHCEDAPCLNVCPEDAIEKIADKVV-VHPEKCVGCALCAEVCPVGAIQIDRGTKVAV 91
           + C  CEDAPC+ VCP  A     D +V +H +KCVGC  C   CP     ++  TKVA 
Sbjct: 58  VSCQQCEDAPCVKVCPTGAAYVGEDGIVSIHGDKCVGCMYCVAACPYKVRFMNPETKVAD 117

Query: 92  KCDGC----IERGSE-VCLEVCPTKAL 113
           KC+ C    + RG E  C+ VCPT AL
Sbjct: 118 KCNFCKDTRLARGEEPACVTVCPTDAL 144



 Score = 33.1 bits (74), Expect = 2e-06
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 10/55 (18%)

Query: 8   DLCVDCKKCERACP--INAIHVFDGIPIRCMHCEDA--------PCLNVCPEDAI 52
           D CV C  C  ACP  +  ++    +  +C  C+D          C+ VCP DA+
Sbjct: 90  DKCVGCMYCVAACPYKVRFMNPETKVADKCNFCKDTRLARGEEPACVTVCPTDAL 144



 Score = 29.3 bits (64), Expect = 3e-05
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 17/71 (23%)

Query: 59  VVVHPE-KCVGCALCAEVCPVGAIQIDRGTKVAVKCDG----------------CIERGS 101
           V+VH E KC+GC  C   C       +  T++ V+ +G                C +   
Sbjct: 6   VMVHDENKCIGCQACNVACRSENGVPEGVTRLQVRVEGPYGEMPHLHFKYHRVSCQQCED 65

Query: 102 EVCLEVCPTKA 112
             C++VCPT A
Sbjct: 66  APCVKVCPTGA 76