Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 336 a.a., Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) from Xanthomonas campestris pv. campestris strain 8004

 Score =  131 bits (329), Expect = 4e-35
 Identities = 81/274 (29%), Positives = 138/274 (50%), Gaps = 54/274 (19%)

Query: 234 HPMSKIIQEVNEVLISMGFKEVKSQIVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNTG 293
           HP+++ ++ + E+   +G++      ++ ++ NF+ L  P  HPAR M DTF+       
Sbjct: 107 HPVTRTLERIVEIFARLGYELSDGPEIEDDWHNFEALNFPPHHPARAMHDTFYFG----- 161

Query: 294 KVPKELLEKVKGIHECGTIDGEKISKGWCYKFDENVSKRTVLRTHTTVSSIKYLASLSES 353
                              DG                   +LRTHT+   ++Y+ +   +
Sbjct: 162 -------------------DGR------------------LLRTHTSGVQVRYMDTAVAT 184

Query: 354 ERENPHKVFCIDRVFRNETIDYKHLPEFYQCEGIVMAEDVNFDNLVGILKEFLRKLGFEK 413
           +   P ++    +V+R+++ D  H P F+Q EG+++ E  NF +L G L EF+R   FE+
Sbjct: 185 KSGPPLRMIAAGKVYRSDS-DQTHSPMFHQVEGLLVDEHSNFADLKGTLSEFVRAF-FER 242

Query: 414 ---VRIRPAYFPFTEPSLEAEVYME----GKGWLELLGAGVFRPEVLEPFGI---KKPVL 463
              +R RP+YFPF EP  E ++  +       WLE+LG G+  P VL   GI   +    
Sbjct: 243 DFEMRFRPSYFPFVEPGAEVDIAWQQPDGSTRWLEVLGCGMVHPNVLRSVGIDPERYTGF 302

Query: 464 AWGIGLSRLAMLRFGLTDIRELHKNDMEWLKKTA 497
           A+G+G+ R AMLR+G+ D+R   +ND+ +L++ A
Sbjct: 303 AFGLGVERFAMLRYGVNDLRAFFENDVRFLRQFA 336