Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 327 a.a., phenylalanine--tRNA ligase subunit alpha from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (369), Expect = 9e-40
 Identities = 95/281 (33%), Positives = 136/281 (48%), Gaps = 53/281 (18%)

Query: 220 DAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKEVKSQIVQTEFWNFDTLFEPQDHPAR 279
           D  +P   I     HP+++ I+ +      +GF       ++ +F NFD L    DHPAR
Sbjct: 93  DVTLPGRRIENGGLHPVTRTIERIESFFGELGFTVESGPEIEDDFHNFDALNIAADHPAR 152

Query: 280 DMQDTFFVKYPNTGKVPKELLEKVKGIHECGTIDGEKISKGWCYKFDENVSKRTVLRTHT 339
              DTFF                                           + + +LRTHT
Sbjct: 153 TDHDTFFF------------------------------------------NPKLMLRTHT 170

Query: 340 TVSSIKYLASLSESERENPHKVFCIDRVFRNETIDYKHLPEFYQCEGIVMAEDVNFDNLV 399
           +   I+ L      ER+ P +     RV+RN+  D  H P F+Q EG+++ E+VNF  L 
Sbjct: 171 SGVQIRTL-----EERQPPLRFIAPGRVYRND-YDQTHTPMFHQVEGMLVDENVNFAQLK 224

Query: 400 GILKEFLRKLGFE--KVRIRPAYFPFTEPSLEAEVYMEGKGWLELLGAGVFRPEVLEPFG 457
           GIL +FL     E  +VR RP+YFPFTEPS E +V  +   WLE+LG G+  P VL   G
Sbjct: 225 GILHDFLCNFFEEDLEVRFRPSYFPFTEPSAEVDVKGKNGKWLEVLGCGMVHPNVLRSVG 284

Query: 458 I---KKPVLAWGIGLSRLAMLRFGLTDIRELHKNDMEWLKK 495
           I   K    A+G+G+ RL MLR+G+ D+R   +ND+ +LK+
Sbjct: 285 IDPEKYSGFAFGMGVERLTMLRYGVNDLRAFFENDLRFLKQ 325