Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 333 a.a., phenylalanyl-tRNA synthetase subunit alpha from Synechococcus elongatus PCC 7942

 Score =  138 bits (347), Expect = 3e-37
 Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 52/280 (18%)

Query: 220 DAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKEVKSQIVQTEFWNFDTLFEPQDHPAR 279
           D  +P +       HP+   I  + ++L+ +G++  +   ++++++NF+ L  P DHPAR
Sbjct: 101 DVTMPGQYRPQGHLHPLQSTIDRILDILVGLGYQVAEGPEMESDYYNFEALNMPADHPAR 160

Query: 280 DMQDTFFVKYPNTGKVPKELLEKVKGIHECGTIDGEKISKGWCYKFDENVSKRTVLRTHT 339
           DMQDTF++   N                                          +LRTHT
Sbjct: 161 DMQDTFYLTDGN------------------------------------------LLRTHT 178

Query: 340 TVSSIKYLASLSESERENPHKVFCIDRVFRNETIDYKHLPEFYQCEGIVMAEDVNFDNLV 399
           +   I+++      E+E P +V    RV+R + +D  H   F+Q E + + E + F +L 
Sbjct: 179 SSVQIRHM-----EEQEPPIRVVAPGRVYRRDAVDATHSAVFHQVELLAVDEGLTFTDLK 233

Query: 400 GILKEFLRKL-GFEKVRIRPAYFPFTEPSLEAEVYMEGKGWLELLGAGVFRPEVLEPFGI 458
           G +K  ++ L G   +R R ++FPFTEPS E +V  +GK WLE+LG G+  P VL+  G 
Sbjct: 234 GTVKTLIQALFGDLPIRFRASFFPFTEPSAEVDVLWQGK-WLEVLGCGMVDPNVLKAVGC 292

Query: 459 KKPV---LAWGIGLSRLAMLRFGLTDIRELHKNDMEWLKK 495
                   A G G+ R AM+  G+ DIR L+ +D+ +L++
Sbjct: 293 DPETYSGFAAGFGVERFAMVLHGMDDIRRLYASDLRFLRQ 332