Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 327 a.a., phenylalanyl-tRNA synthetase subunit alpha (RefSeq) from Shewanella amazonensis SB2B

 Score =  141 bits (355), Expect = 4e-38
 Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 53/281 (18%)

Query: 220 DAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKEVKSQIVQTEFWNFDTLFEPQDHPAR 279
           D  +P   +     HP+++ I+ +      +GF   +   ++ +F NFD L   + HPAR
Sbjct: 93  DVTLPGRTLDNGGLHPVTRTIERIESFFGELGFTVKQGPEIEDDFHNFDALNISEHHPAR 152

Query: 280 DMQDTFFVKYPNTGKVPKELLEKVKGIHECGTIDGEKISKGWCYKFDENVSKRTVLRTHT 339
              DTF+                                           + + +LRT T
Sbjct: 153 ADHDTFYF------------------------------------------NPKVMLRTQT 170

Query: 340 TVSSIKYLASLSESERENPHKVFCIDRVFRNETIDYKHLPEFYQCEGIVMAEDVNFDNLV 399
           +   I+ +    E+E+  P ++    RV+RN+  D  H P F+Q EG+++ E+VNF  L 
Sbjct: 171 SGVQIRTM----ETEKP-PLRIISPGRVYRND-YDMTHTPMFHQVEGLLVDENVNFAELK 224

Query: 400 GILKEFLRKLGFE--KVRIRPAYFPFTEPSLEAEVYMEGKGWLELLGAGVFRPEVLEPFG 457
           GIL +FLR    E  +VR RP+YFPFTEPS E +V  +   WLE+LG G+  P VL   G
Sbjct: 225 GILHDFLRNFFEEDLQVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVG 284

Query: 458 I---KKPVLAWGIGLSRLAMLRFGLTDIRELHKNDMEWLKK 495
           I   K    A+G+G+ RL MLR+G+ D+R   +ND+ +LK+
Sbjct: 285 IDPEKYSGFAFGMGVERLTMLRYGVNDLRAFFENDLRFLKQ 325