Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 336 a.a., phenylalanyl-tRNA synthetase subunit alpha (RefSeq) from Shewanella loihica PV-4

 Score =  142 bits (358), Expect = 2e-38
 Identities = 112/374 (29%), Positives = 179/374 (47%), Gaps = 65/374 (17%)

Query: 133 DIEEEILKKVSINPDLSTYSKDEVKIVENLKKRGFLN--LKEVVDRSFEIKDAGTEFIKN 190
           +I E+ L+ +    DL     D+++ V+ L K+G +   +K +   S E K A  + +  
Sbjct: 15  EIVEQALQAIEGTDDLKAL--DDLR-VDYLGKKGKITDMMKMMGKLSPEEKPAFGQAVN- 70

Query: 191 PIEIKEEITQLTREMIVSGKWKDYFIR----PYDAKIPTEDIYPAKAHPMSKIIQEVNEV 246
             + K+ + Q   E I   K ++   +      D  +P   I     HP+++ I+ +   
Sbjct: 71  --QAKQAVQQKLSERIEGLKAQELEAKLSAESIDVTLPGRRIDNGGLHPVTRTIERIETF 128

Query: 247 LISMGFKEVKSQIVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNTGKVPKELLEKVKGI 306
              +GF   +   ++ +F NFD L   + HPAR   DTF+                    
Sbjct: 129 FGELGFSVKQGPEIEDDFHNFDALNISEHHPARADHDTFYF------------------- 169

Query: 307 HECGTIDGEKISKGWCYKFDENVSKRTVLRTHTTVSSIKYLASLSESERENPHKVFCIDR 366
                                  + + +LRT T+   I+ +    E+E+  P ++    R
Sbjct: 170 -----------------------NPKLMLRTQTSGVQIRTM----ETEKP-PLRIISPGR 201

Query: 367 VFRNETIDYKHLPEFYQCEGIVMAEDVNFDNLVGILKEFLRKLGFE--KVRIRPAYFPFT 424
           V+RN+  D  H P F+Q EG+ + E+VNF  L GIL +FLR    E  +VR RP+YFPFT
Sbjct: 202 VYRND-YDQTHTPMFHQVEGLFVDENVNFAELKGILHDFLRNFFEEDLQVRFRPSYFPFT 260

Query: 425 EPSLEAEVYMEGKGWLELLGAGVFRPEVLEPFGI---KKPVLAWGIGLSRLAMLRFGLTD 481
           EPS E +V  +   WLE+LG G+  P VL   GI   K    A+G+G+ RL+MLR+G+ D
Sbjct: 261 EPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPEKYQGFAFGMGVERLSMLRYGVND 320

Query: 482 IRELHKNDMEWLKK 495
           +R   +ND+ +LK+
Sbjct: 321 LRSFFENDLRFLKQ 334