Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 357 a.a., phenylalanyl-tRNA synthetase alpha chain from Caulobacter crescentus NA1000

 Score =  129 bits (325), Expect = 1e-34
 Identities = 89/291 (30%), Positives = 137/291 (47%), Gaps = 61/291 (20%)

Query: 220 DAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKEVKSQIVQTEFWNFDTLFEPQDHPAR 279
           D  +P         HP  + + EV  +   MGF   +   ++ +F NF  L  P+ HPAR
Sbjct: 93  DLSLPAPYRRKGSVHPTMQTMDEVVAIFAEMGFAVAEGPDIEDDFHNFTALNFPEKHPAR 152

Query: 280 DMQDTFFVKYPNTGKVPKELLEKVKGIHECGTIDGEKISKGWCYKFDENVSKRTVLRTHT 339
           +M DTFF         PKE              DGE                R +LRTHT
Sbjct: 153 EMHDTFFFN-------PKE--------------DGE----------------RMLLRTHT 175

Query: 340 TVSSIKYLASLSESERENPHKVFCIDRVFRNETIDYKHLPEFYQCEGIVMAEDVNFDNLV 399
           +   ++ + S     ++ P ++    R +R +  D  H P F+Q EG+V+ + ++  +L 
Sbjct: 176 SPVQVRTMVS-----QKPPIRIIAPGRTYRCDN-DATHTPVFHQVEGLVIDKGIHMGHLK 229

Query: 400 GILKEFLRKLGFE----KVRIRPAYFPFTEPSLEAEVYM----------EGKGWLELLGA 445
             L+ FL +  FE      + RP +FPFTEPS E +V            +G  WLE+LG 
Sbjct: 230 WTLETFLARF-FETDAVTTQFRPHHFPFTEPSAEMDVQCDRSGGEIKIGQGTSWLEILGC 288

Query: 446 GVFRPEVLEPFGI---KKPVLAWGIGLSRLAMLRFGLTDIRELHKNDMEWL 493
           G+  P VL   GI   +    A+G+G+ RL ML++G+ D+R++  +D+ WL
Sbjct: 289 GMVHPNVLRACGIDPDEYQGFAFGMGVDRLGMLKYGMPDLRDMWSSDVRWL 339