Pairwise Alignments

Query, 500 a.a., phenylalanine--tRNA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 339 a.a., phenylalanyl-tRNA synthetase alpha chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  125 bits (315), Expect = 2e-33
 Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 66/291 (22%)

Query: 225 TEDIYPAKA---HPMSKIIQEVNEVLISMGFKEVKSQIVQTEFWNFDTLFEPQDHPARDM 281
           T   YP +    HP++ +  EV ++   +GF   +   ++ ++  F  L   +DHPARDM
Sbjct: 90  TRSAYPIELGTRHPITIVKNEVIDIFARLGFSIAEGPEIEDDWHVFSALNFAEDHPARDM 149

Query: 282 QDTFFVK-YPNTGKVPKELLEKVKGIHECGTIDGEKISKGWCYKFDENVSKRTVLRTHTT 340
           QDTFF++ +P+                                          VLRTHT+
Sbjct: 150 QDTFFIEAHPDV-----------------------------------------VLRTHTS 168

Query: 341 VSSIKYLASLSESERENPHKVFCIDRVFRNETIDYKHLPEFYQCEGIVMAEDVNFDNLVG 400
               + + +      + P ++ C  RV+RNE I Y+    F+Q E + + ++V+F +L  
Sbjct: 169 SVQTRVMET-----SKPPIRIICPGRVYRNEAISYRAHCFFHQVEALYVDKNVSFTDLKQ 223

Query: 401 ILKEFLRKL-GFE-KVRIRPAYFPFTEPSLEAEV-----------YMEGKGWLELLGAGV 447
           +L  F +++ G + K+R+RP+YFPFTEPS E ++           + +  GW+E+LG G+
Sbjct: 224 VLLLFAKEMFGTDTKIRLRPSYFPFTEPSAEMDISCNICGGKGCPFCKHTGWVEILGCGM 283

Query: 448 FRPEVLEPFGIKKPV---LAWGIGLSRLAMLRFGLTDIRELHKNDMEWLKK 495
             P VLE  GI   V    A G+G+ R+  L++ + D+R   +ND  +LK+
Sbjct: 284 VDPNVLESNGIDSKVYSGYALGMGIERITNLKYQVKDLRMFSENDTRFLKE 334