Pairwise Alignments

Query, 332 a.a., TIGR01212 family radical SAM protein from Methanococcus maripaludis S2

Subject, 330 a.a., putative radical SAM protein (RefSeq) from Shewanella loihica PV-4

 Score =  177 bits (450), Expect = 2e-49
 Identities = 93/295 (31%), Positives = 165/295 (55%), Gaps = 11/295 (3%)

Query: 30  ITQYGLYTKREKGYKTFKVAVDAGFSCPNKDGTIDTEGCIFCPKMGRVISVEYCNVKYSL 89
           +  +GL+ KR+ G +  K+ +DA F+CPN+DGT+   GC FC       +V   + ++  
Sbjct: 26  VNTFGLHCKRQYGQRLKKLTLDAKFTCPNRDGTLGRGGCTFC-------NVASFSHEHGS 78

Query: 90  KEQIEHQIRRNKEKG---IEKFYVYFYPGTNTHASPEYLKELWDFALSFDDVLGISIGTR 146
            + I  Q+   +E+      KF  YF   T+T+   + LK+ +D A++  D++G+ +GTR
Sbjct: 79  IDSIAVQLANGRERAQGKSSKFIAYFQAYTSTYDEYQLLKQRYDEAVADSDIVGLCVGTR 138

Query: 147 PDCLEDEKLDILENYVKEGYEIWIDLGIQTMHDKTLDFLNRKHSSDDVRRVLLECKKRGI 206
           PDC+ DE + +L  Y   G E+W++LG+Q+ + +TL  +NR H  ++ R  ++  +K G+
Sbjct: 139 PDCVSDEVIALLAGYQARGLEVWLELGLQSANLETLKRINRGHGFEEYRDTVIRARKAGL 198

Query: 207 LVCGHIILGLPDESWDMMMETAKILSDLEIDALKIYPLVVVENTKLEEIYWKGEYKSLDE 266
            VC H+ILGLP ES +  + + + + D  +D LKI+PL +VE + + + +  G    L +
Sbjct: 199 KVCTHLILGLPGESHEDFLASHRAVLDAGVDGLKIHPLHIVEGSTMAKAWRAGRMSLLTQ 258

Query: 267 KQYIHLVADFLEHISKYVIIQRVSKDKVPEEIKISPEWSLKRLRILNEVSKLLDK 321
           + Y   V + +    K VI  RV+     + + ++P+W   R   L  + K L++
Sbjct: 259 EAYAESVGELIRLTPKEVIFHRVTA-YAKKPMLLAPDWCAYRWEGLVAIVKNLER 312