Pairwise Alignments

Query, 332 a.a., TIGR01212 family radical SAM protein from Methanococcus maripaludis S2

Subject, 324 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  183 bits (464), Expect = 6e-51
 Identities = 104/300 (34%), Positives = 168/300 (56%), Gaps = 8/300 (2%)

Query: 36  YTKREKGYKTFKVAVDAGFSCPNKDGTIDTEGCIFCPKMGRVISVEYCNVKYSLKEQIEH 95
           + ++   YK  K++++AGF+CPN+DGT    GC +C    +  + +YC  + S+  Q+E 
Sbjct: 13  FLRKHFPYKVQKISLNAGFTCPNRDGTKGWGGCTYCNN--QTFNPDYCRTEKSIATQLEE 70

Query: 96  QIRRNKEKGIE-KFYVYFYPGTNTHASPEYLKELWDFALSFDDVLGISIGTRPDCLEDEK 154
                  K  E K+  YF   TNT+A  E LK  ++ AL  D V+G+ IGTRPDC+ +E 
Sbjct: 71  GKCFFAHKYPEMKYLAYFQAYTNTYAELEGLKRKYEEALQVDGVVGLVIGTRPDCMPEEL 130

Query: 155 LDILENYVKEGYEIWIDLGIQTMHDKTLDFLNRKHSSDDVRRVLLECKKRGILVCGHIIL 214
           L  LE   +  + + ++ GI++  D+TL  +NR H+  D    +      GIL  GH+IL
Sbjct: 131 LQYLEELNRHTF-LMVEYGIESASDETLRRINRGHTYADTVEAVQRTAACGILTGGHVIL 189

Query: 215 GLPDESWDMMMETAKILSDLEIDALKIYPLVVVENTKLEEIYW---KGEYKSLDEKQYIH 271
           GLP E+ D M+E A ILS L +  LKI+ L ++  T++   Y    +G +   +  +YI 
Sbjct: 190 GLPGETHDTMVEQAGILSALPLSTLKIHQLQLIRGTRMAHEYEENPEGFHLFTEVDEYID 249

Query: 272 LVADFLEHISKYVIIQRVSKDKVPEEIKISPEWSLKRLRILNEVSKLLDKRKTKQGSKYK 331
           LV D++EH+   ++++R      P+E+ I+P+W LK    +  + K + +R   QG KY+
Sbjct: 250 LVIDYVEHLRPDLVLERFVSQS-PKELLIAPDWGLKNYEFVTRLQKRMKERGAYQGKKYR 308