Pairwise Alignments

Query, 332 a.a., TIGR01212 family radical SAM protein from Methanococcus maripaludis S2

Subject, 376 a.a., coproporphyrinogen III oxidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 10/217 (4%)

Query: 68  CIFCPKMGRVISVEYCNVKYSLKEQIEHQIRRNKEKGIEKFYVYFYPGTNTHASPEYLKE 127
           CI+C       S    +  ++L  ++E  +R+   KG     +YF  GT +       K 
Sbjct: 15  CIYCDFYSTTRSELKTHYVHTLCRELE--MRKEYLKGEPVETIYFGGGTPSQLEEADFKH 72

Query: 128 LWDFA---LSFDDVLGISIGTRPDCLEDEKLDILENYVKEGYEIWIDLGIQTMHDKTLDF 184
           +++        +    I++   PD L  E L +L +         I +GIQT  D TL  
Sbjct: 73  IFETIRENYGMEHCREITLEANPDDLSQEYLKMLSSLPFNR----ISMGIQTFDDTTLQL 128

Query: 185 LNRKHSSDDVRRVLLECKKRGIL-VCGHIILGLPDESWDMMMETAKILSDLEIDALKIYP 243
           L R+HSS      +  C++ G   +   +I GLP E+ +  +   +    L+++ +  Y 
Sbjct: 129 LKRRHSSQTAVEAVRRCREAGFQNISIDLIYGLPGETKERWVNDLRQAIRLDVEHISAYH 188

Query: 244 LVVVENTKLEEIYWKGEYKSLDEKQYIHLVADFLEHI 280
           L   E+T +  +  + + + +DE   +      +EH+
Sbjct: 189 LTYEEDTPIYNMLKQHQIEEVDEDSSLQFFTLLIEHL 225