Pairwise Alignments

Query, 332 a.a., TIGR01212 family radical SAM protein from Methanococcus maripaludis S2

Subject, 309 a.a., putative radical SAM protein (RefSeq) from Shewanella sp. ANA-3

 Score =  171 bits (433), Expect = 2e-47
 Identities = 94/280 (33%), Positives = 153/280 (54%), Gaps = 10/280 (3%)

Query: 30  ITQYGLYTKREKGYKTFKVAVDAGFSCPNKDGTIDTEGCIFCPKMGRVISVEYCNVK-YS 88
           +  +G   K + G +  K+ +DA F+CPN+DGT+   GC FC     V S  Y   +  S
Sbjct: 7   VNTFGAVCKAKYGERLRKLTIDAKFTCPNRDGTLGRGGCTFC----NVASFSYQQAETLS 62

Query: 89  LKEQIEHQIRRNKEK----GIEKFYVYFYPGTNTHASPEYLKELWDFALSFDDVLGISIG 144
           + EQ+E    R KE       +KF  YF   T+T+   + L   +D A+   +++G+ +G
Sbjct: 63  ISEQLEQGKARYKEAKPKLNADKFIAYFQAYTSTYDEYQVLMAKYDEAVKDSEIVGLCVG 122

Query: 145 TRPDCLEDEKLDILENYVKEGYEIWIDLGIQTMHDKTLDFLNRKHSSDDVRRVLLECKKR 204
           TRPDC+ D  LD+L +Y ++G ++W++LG+QT +D+TL  +NR H        +   + R
Sbjct: 123 TRPDCVPDNVLDLLASYQQKGVDVWLELGLQTANDRTLHKINRGHDFACYCDTVARARSR 182

Query: 205 GILVCGHIILGLPDESWDMMMETAKILSDLEIDALKIYPLVVVENTKLEEIYWKGEYKSL 264
           G+ VC H+ILGLP E+    M T + +    +D LK++PL VVE + + + +  G    L
Sbjct: 183 GLKVCTHLILGLPGETHLDYMATLQAVLAQGVDGLKLHPLHVVEGSTMAKAWRAGRLPLL 242

Query: 265 DEKQYIHLVADFLEHISKYVIIQRVSKDKVPEEIKISPEW 304
             ++Y   V + + H  K VI  RV+     + I ++P+W
Sbjct: 243 SIEEYAACVGELVRHTPKEVIFHRVTA-YAKKPILLAPDW 281