Pairwise Alignments

Query, 447 a.a., S-layer protein from Methanococcus maripaludis S2

Subject, 446 a.a., S-layer protein from Methanococcus maripaludis JJ

 Score =  741 bits (1913), Expect = 0.0
 Identities = 363/447 (81%), Positives = 407/447 (91%), Gaps = 1/447 (0%)

Query: 1   MSAPSKLIALFILTVLCTLTISYGMVVDDPLIVVNSEKVDKTYAELLMDKYYTKRSIEVN 60
           MSAPSKLIALFILTVLCTL ISYGMVVDDPLIVVNSEKVDK+YAELLMDKYYTKR+IEVN
Sbjct: 1   MSAPSKLIALFILTVLCTLPISYGMVVDDPLIVVNSEKVDKSYAELLMDKYYTKRTIEVN 60

Query: 61  SDNDIVVNENIIYNVPALDEFEINDGKGKLLVEFTKSGESVTYKNFEYEEEIESDDEGDE 120
           SDN+IVVNENIIYNVPA+DEFEINDGKG LLVEFTKSGE+VTYKNFEYEEEIESDDEGDE
Sbjct: 61  SDNEIVVNENIIYNVPAIDEFEINDGKGNLLVEFTKSGETVTYKNFEYEEEIESDDEGDE 120

Query: 121 VTFMGKTYKLIEYDEDEKIVLGNKVEDIDTTEEFSYDIYTFKIIGKDSTGEVLVSVYEGT 180
           VTFMGKTY+++EY E  KIVLGN +ED +T++EF+Y+ YT K++  +S GE++VSVY+G 
Sbjct: 121 VTFMGKTYRVLEY-ESGKIVLGNTIEDFETSDEFNYEGYTIKVVASNSDGEIMVSVYKGN 179

Query: 181 DRIENVKMYPDDTYFVSGSTVSIYYDEYLESGDTAYFFFEIYDSLEFEDGKSISGYSDFD 240
           DR++N+KMYPDD+  +SGS++S+YYDEYL SGDT YFFFE+ DSLE EDG+S     +FD
Sbjct: 180 DRVDNLKMYPDDSCMISGSSLSLYYDEYLTSGDTPYFFFELSDSLELEDGESFEDNGEFD 239

Query: 241 TEIDGQTITLEYDNPKSLSENFGLLNYKVNLVDVNGEDLTAFFTVTQNLNYEYDMDEGTK 300
            EIDG+ ITL+YD+PKSLS+NF LLNY V L DV+ EDLT FFTVTQ  +YEYDMDEGTK
Sbjct: 240 VEIDGKKITLDYDSPKSLSKNFELLNYNVELTDVSSEDLTVFFTVTQTESYEYDMDEGTK 299

Query: 301 YFGNNIFAVKLENDEEDDWDDELYLYKNNKKYDKIVDYQGSVQLVDQDELLSASSDLILI 360
           YFGNNIFAVKL+NDEE+DWDDELYLYKNNKKYDKIVDYQGSVQLVDQDELLSASSDLILI
Sbjct: 300 YFGNNIFAVKLDNDEENDWDDELYLYKNNKKYDKIVDYQGSVQLVDQDELLSASSDLILI 359

Query: 361 GGPVSNKVTESIQNSLNIEVTNDYPGEGKGVIQTITNPNNAESTILVLAGSDREGTKACV 420
           GGPVSNKVTESIQNSL++EVTNDYPGEGKGVIQTITNPNN  S ILVLAGSDR+GTKACV
Sbjct: 360 GGPVSNKVTESIQNSLSVEVTNDYPGEGKGVIQTITNPNNGNSKILVLAGSDRDGTKACV 419

Query: 421 LALNQGLYSGTGALTVKLTGEDSVSVI 447
           LALNQGLYSG+G L VKLTG+DSVS I
Sbjct: 420 LALNQGLYSGSGNLVVKLTGDDSVSAI 446