Pairwise Alignments

Query, 447 a.a., S-layer protein from Methanococcus maripaludis S2

Subject, 1273 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ

 Score = 68.6 bits (166), Expect = 1e-15
 Identities = 85/338 (25%), Positives = 147/338 (43%), Gaps = 45/338 (13%)

Query: 97   SGESVTYKNFEYEEEIESDDEGDEVTFMGKTYKLIEYDEDEKIVLGNKVEDIDTT-EEFS 155
            S  +VT  + +Y  + + + EG   T    T    EY        G +++D D      S
Sbjct: 940  SSNTVTNSS-DYAIDFDGEGEGAYATVFNNTVLASEY--------GIRLDDCDEDYSNIS 990

Query: 156  YD-IYTFK---IIGKDSTG-EVLVSVYEGTDRIENVKMYPDDTYFVSGSTVSIYYDEYLE 210
            Y+ +Y+ +   IIG + TG  + ++ +  TD +    + P +T     S +S +  EY  
Sbjct: 991  YNTVYSSEYPLIIGDEVTGCNIYLNNFIYTDTVNISGITPGETG--KNSFLSPFKIEYKY 1048

Query: 211  SGDTAYFFFEIYDSLEFEDGKSISGYSDFDTEIDGQTITLEYDNPKSLSENFGLLNYKVN 270
            +G++   F           G   S YS  D + +G   T  Y       E+  L N    
Sbjct: 1049 NGNSYSNFL----------GNYWSDYSGTDADANGIGDT--YYLYGCDDESDYLENDTAP 1096

Query: 271  LVDVNGEDLTAFFTVTQNLNYEYDMDEGTKYFGNNIFAVKLENDEEDDWDDELYLYKNNK 330
            L+ + G DL  +  VT +         G + + ++I      +DE D    + ++     
Sbjct: 1097 LIGMWGIDLIPYTPVTTHTTRS--SGGGGRSYDSDI------SDEIDSKVIKNFVSSATV 1148

Query: 331  KYDKIVDYQGSVQL---VDQDELLSASSDLILIGGPVSNKVTESIQNSLNIEVTNDYPGE 387
             +   +D Q + +L   +   E    S + +++GGP +N       +   + ++NDYPGE
Sbjct: 1149 LFGNEIDQQFAEELRERIQNAEGFKISGNAVIVGGPKANPFAREYNDQFEMPISNDYPGE 1208

Query: 388  GKGVIQTITNPNNA-----ESTILVLAGSDREGTKACV 420
             KGVIQ +T  +N+       TI+ +AGSDR GT+A +
Sbjct: 1209 NKGVIQVMTIQDNSGKIVKSYTIVYIAGSDRLGTQAAL 1246