Pairwise Alignments

Query, 447 a.a., S-layer protein from Methanococcus maripaludis S2

Subject, 599 a.a., Ig-like domain-containing protein from Methanococcus maripaludis JJ

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 107/461 (23%), Positives = 182/461 (39%), Gaps = 60/461 (13%)

Query: 20  TISYGMVVDDPLIVVNSEKVDKTYAELLMDKYYTKRSIEVNSDNDIVVNENIIYNVPALD 79
           T+S+ +   +P + VN+           ++K Y   S  +N     +  ++++  +  L+
Sbjct: 164 TVSFTVDTVNPEVTVNT-----------VEKSYNYNSSILNVTATDINLQSVVAEINGLE 212

Query: 80  EFEINDGKGKLLVE--FTKSGESVTYKNFEYEEEIESDDEGDEVTF-MGKTYKLIEYD-- 134
              +N   G  L    F +   +V     +    + S +    VTF +  T  +I  +  
Sbjct: 213 NITLNGSTGYFLTSEIFNEGLNTVKIYATDLAGNVNSSEN---VTFRVDLTDPVITVNTV 269

Query: 135 EDEKIVLGNKVEDIDTTEEFSYDIYTF----KIIGKDSTGEVLVSVYEGTDRIENVKMYP 190
           E E    G+ V +    E++   +  F    +I   +STG  L S  E  D + NV MY 
Sbjct: 270 EGEYFNNGSDVLNFTVDEDYIDSVTAFNGSTEISLDNSTGNYLNSA-ELADGVYNVTMYS 328

Query: 191 DDTYFVS-GSTVSIYYDEYLES-------GDTAYFFFEIYDSLEFEDGKSISGYSDFDTE 242
           +DT       TVS   D              T Y       ++   D  S+S  S    +
Sbjct: 329 NDTASNKVNKTVSFTVDTVNPEVTVNKPVNGTTYTSSSAAINVTAND--SLSNVSSVIAK 386

Query: 243 IDG-QTITLEYDNPKSLSENFGLL---NYKVNLVDVNGEDLTAFFTVTQNLNYEYDMDEG 298
           I   + +TL +D  +  + N G L   NY++ ++     DL      ++N++    +   
Sbjct: 387 IGSVRNVTLSFDG-EYYTGNTGTLSNGNYEITII---ATDLAGNVNSSENVSISIAVPRS 442

Query: 299 TKYFGNNIFAVKLENDEEDDWDDELYLYKNNKKYDKIV-------DYQGSV-QLVDQDEL 350
           +   G         +D  D +    ++ KN      IV       +Y G + + +   E 
Sbjct: 443 SSGGGGGS---SYSSDLSDGFTS--FVIKNAVSNSNIVYGSEIDGEYAGELRENLYNSEN 497

Query: 351 LSASSDLILIGGPVSNKVTESIQNSLNIEVTNDYPGEGKGVIQ---TITNPNNAEST--I 405
              S D I++GGP SN       +   + +TND PGE +GVIQ      +  N   T  +
Sbjct: 498 YELSRDTIIVGGPESNGFANRYDSEFGVAITNDNPGENRGVIQIQNIQVHVGNFIKTYQV 557

Query: 406 LVLAGSDREGTKACVLALNQGLYSGTGALTVKLTGEDSVSV 446
           + +AGSDR GT+A +          +  +TVK T    V V
Sbjct: 558 IYIAGSDRYGTQAALEYFKTLDELPSEPITVKWTANGPVLV 598