Pairwise Alignments

Query, 447 a.a., S-layer protein from Methanococcus maripaludis S2

Subject, 1050 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ

 Score = 67.0 bits (162), Expect = 3e-15
 Identities = 87/409 (21%), Positives = 171/409 (41%), Gaps = 70/409 (17%)

Query: 56   SIEVNSDNDIVVNENIIYNVPALDEFEINDGKGKLLVEFTKSGESVTYKNFEYEEEIESD 115
            SIE   DN+ + + N+ Y +     +  N     ++ +   +G             I S+
Sbjct: 641  SIESYGDNNSISSNNVDYMIYLKGNY--NTISSNIVQDHISAGGGYN--------TISSN 690

Query: 116  DEGDEVTFMGKTYKLIEYDEDEKIVLGNKVEDIDTTEEFSYDIYTFKIIGKDSTGEVLVS 175
               D +   G+ Y LI        V+      ID   ++ Y I  +  +  ++     V 
Sbjct: 691  IVQDHIWTRGQ-YTLIS----SNTVINASYYAIDPNGDYDYGIDAYATVFNNTVLASKVG 745

Query: 176  VY-----EGTDRIENVKMYPDDTYFVSGSTVS---IYYDEYLESGDTAYFF--------- 218
            ++     EG   I    +Y DD   + G  ++   IY + ++ +G++             
Sbjct: 746  IWLDNYCEGYSNITQNTVYADDYPIIIGDNITGCNIYLNNFIHTGNSTDISGIMPNTTVN 805

Query: 219  ------FEIYDSLEFEDGKSISG--YSDFD-TEIDGQTITLEY-----DNPKSLSENFGL 264
                  FEI  +       +I G  +SD+  T+ DG  I   Y     D  ++  E++  
Sbjct: 806  NSLVSPFEIEYNYNGNTYSNILGNYWSDYSGTDTDGNGIGDTYYIYGCDYERTYGEDYYD 865

Query: 265  LNYKVN----LVDV-NGEDLTAFFTVTQNLNYEYDMDEGTKYFGNNIFAVKLENDEEDDW 319
            ++Y  N    L+D+ NG ++  +   +++         G + + ++I      +DE +  
Sbjct: 866  IDYLENDTAPLIDMWNGNEIGNYVATSRSSG-----GSGGRSYDSDI------SDEIESK 914

Query: 320  DDELYLYKNNKKYDKIVDYQGSVQLVDQDELLSA---SSDLILIGGPVSNKVTESIQNSL 376
              + ++   +  Y   +D Q + +L ++ +  +    S + +++GGP+SN       +  
Sbjct: 915  VIKNFVSSASVIYGNEIDQQYAEELREKIQNANGYKISGNAVIVGGPLSNGFAREYNDQF 974

Query: 377  NIEVTNDYPGEGKGVIQTITNPNNA-----ESTILVLAGSDREGTKACV 420
             + ++NDYPGE KG+IQ +   +N        TI+ +AGSDR GT+A +
Sbjct: 975  EMPISNDYPGENKGIIQVLKVQDNTGKIVQSYTIVYIAGSDRLGTQAAL 1023