Pairwise Alignments

Query, 447 a.a., S-layer protein from Methanococcus maripaludis S2

Subject, 528 a.a., S-layer protein from Methanococcus maripaludis JJ

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 91/358 (25%), Positives = 150/358 (41%), Gaps = 66/358 (18%)

Query: 98  GESVTYKNFEYEEEIESDD------EGDEVTFMGKTYKLIEYDEDEKIVLGNKVEDIDTT 151
           G+ + Y +  Y  ++ +        EG E+ F+GK Y++++ +ED+ I+         T 
Sbjct: 201 GKDMVYASIVYPNQVSAFKLTKDLKEGYEIPFLGKKYRIVQINEDDNIIYLGTASYDGTL 260

Query: 152 EEFSY------DIYTFKIIGKDSTGEVLVSVYEGTDRIE-NVKMYPDDTYF--VSGSTVS 202
           E+ +Y       I   +I+       V +S+    + IE + ++   D  F  ++G    
Sbjct: 261 EQGNYISSGDYQIVLGEILESGDEYSVEISILRNGNIIEEHTEILRSDKSFSVIAGDLGV 320

Query: 203 IYYDEYLESG-DTAYFFFEIYDSLEFEDGKSISGYSDFDTEIDGQTITLEYDNPKSLSEN 261
             +D +  +  DT Y    I  SL               TE++   +  EY N       
Sbjct: 321 TVHDVWTNAAADTGYADITICRSL---------------TELE---LGEEYVN------- 355

Query: 262 FGLLNYKVNLVDVNGEDLTAFFTVTQN-----LNYEYDMDEGTKYFGNNIFA--VKLEND 314
               N++V  V   G  +    T   N     L Y     EG         A  V L  D
Sbjct: 356 ----NWEVRAVTNTGGTIDFLKTYEDNTVGIALVYAGSDIEGINDGDRIKIADYVNLVFD 411

Query: 315 EEDDWDDELYLYKNNKKYDK------IVDYQGSVQLV---DQDELLSASSDLILIGGPVS 365
           +EDD D  +  +K  +          ++   G V  +   D+ +L  A  +LILIGGPV+
Sbjct: 412 DEDDLDKMVAEFKAERTVTTGSTGGTVISKSGEVPKIIMDDEIKLDEADKNLILIGGPVA 471

Query: 366 NKVTESIQNSLNIEVTNDYPGEGKGVIQTITNPNNAESTILVLAGSDREGTKACVLAL 423
           NK+T+ +QN   I + N+ P     +I+   N NN    +LV+AG DR  T++ VL+L
Sbjct: 472 NKLTKELQNEGKIYIDNESPATA-SLIEGAANGNN----VLVIAGGDRYSTESAVLSL 524