Pairwise Alignments

Query, 458 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 480 a.a., Predicted Zn-dependent proteases and their inactivated homologs from Pseudomonas stutzeri RCH2

 Score =  184 bits (466), Expect = 7e-51
 Identities = 132/435 (30%), Positives = 208/435 (47%), Gaps = 19/435 (4%)

Query: 24  ADLRIVTGESNNIIQKDGIIDEISSGISSGVIVRVLEKNGWGLATSNSVSLKNIEEIIKK 83
           ADL      S + + +DGI+ E    +  GV VR L     G A SN+++   + +  + 
Sbjct: 38  ADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVRALSGEKTGFAYSNAITADALRQAAQA 97

Query: 84  AQGMAKISNIHTKKSIELKEI-PIIQDNTKADVKIHPENISIEEKKEYLK--SAHENMSG 140
           A+ +A+       K +      P+   +   D       +S  EK E LK          
Sbjct: 98  ARSIARSGQQGQVKVLSKAAFAPLYSRDNPLD------GLSRAEKVELLKRIDVATRALD 151

Query: 141 EKIVSTSVSYSDGEGHSILMTSEGTRIENESVKALLRMTA---IAKDGTLQFAFDRIGGN 197
            +I   +VS +    H ++   +G    +  ++ L+R      + ++G  +      GG 
Sbjct: 152 PRIKQVTVSLAGVWEHILVAGMDGGMATD--IRPLVRFNVSVIVEQNGRRERGGQGGGGR 209

Query: 198 -GFEV-IKNAKIEEMAKNTKERAVRLLTAESCPKGTFDVILDPELAGVFIHEAVGHAAEA 255
            G++  +   +    A+    +A+  L A   P G+  V+L P  +GV +HEAVGH  E 
Sbjct: 210 TGYQYFLTEDRAMGYAREALRQALVNLEAVPAPAGSLPVVLGPGWSGVLLHEAVGHGLEG 269

Query: 256 DLVLQNDSVFHDKLGNSVGSEEVTVIDDATIEKSFGQYKYDHEGVKGEKTTLIEDGVLNG 315
           D   +  S +  ++G  V S   T++DD T+    G    D EG   + TTLIE+G+L G
Sbjct: 270 DFNRKGSSAYSGRIGEQVASSLCTIVDDGTLADRRGSLSVDDEGTPTQCTTLIENGILKG 329

Query: 316 YLHSRETAGRLNMDVTGNARAEG-LNKPIVRMSNTYIKPGSWKFDELLEDTKTGIFLKGS 374
           Y+  +  A  + +  TGN R E   + P+ RM+NTY+  G     E++   K GI+    
Sbjct: 330 YIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGESDPQEIIRSVKKGIYCASL 389

Query: 375 RGGQVDTGKGLFQFNAVEAFLIEDGKLTKPLRDAGLSGEILDILHHIDAVSDEFEL--SV 432
            GGQVD   G F F+  EA+LIEDGK+T P++ A L G   ++++ +  V ++  L   V
Sbjct: 390 GGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNGPEVMNRVSMVGNDLALDSGV 449

Query: 433 GYCGKGGQSVPVGDG 447
           G CGK GQSVPVG G
Sbjct: 450 GTCGKDGQSVPVGVG 464