Pairwise Alignments

Query, 458 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 482 a.a., peptidase U62, modulator of DNA gyrase (RefSeq) from Shewanella loihica PV-4

 Score =  180 bits (456), Expect = 1e-49
 Identities = 127/444 (28%), Positives = 216/444 (48%), Gaps = 20/444 (4%)

Query: 23  YADLRIVTGESNNIIQKDGIIDEISSGISSGVIVRVLEKNGWGLATSNSVSLKNIEEIIK 82
           ++DL        + + +DGI+ E S  I  GV VR +     G A ++ ++   +   ++
Sbjct: 35  FSDLYFQGSRHESWVLEDGIVKEGSFHIERGVGVRAISGEKTGFAYADEITPAALSAAVE 94

Query: 83  KAQGMAKISNIHTKKSIELKEI-PIIQDNTKADVKIHPENISIEEKKEYLKSAHENMSGE 141
            A+G++   N    ++ +  ++ P+ Q           + I++ ++ +    A+      
Sbjct: 95  AARGISAAGNSGRVQAWKQHKVTPLYQSADPIAAMEEVKKIALLKQAD----AYVRSLDP 150

Query: 142 KIVSTSVSYSDGEGHSILMTSEGTRIENESVKALLRMTA---IAKDGTLQFAFDRIGG-N 197
           +I+   +S S      ++  S+GT   +  ++ L+R      + ++G  +      GG +
Sbjct: 151 RIIQVVISLSGVHEEILVAASDGTLAAD--IRPLVRFNCSVVLEQEGKRERGASGGGGRH 208

Query: 198 GFEVIKNAKIEEM------AKNTKERAVRLLTAESCPKGTFDVILDPELAGVFIHEAVGH 251
            ++V   +  + +      A+    +A   LTA   P G   V+L     GV +HEAVGH
Sbjct: 209 DYQVFFESGDDGLPSCFAFAREAVRQASVNLTAIDAPAGEMPVVLGAGWPGVLLHEAVGH 268

Query: 252 AAEADLVLQNDSVFHDKLGNSVGSEEVTVIDDATIEKSFGQYKYDHEGVKGEKTTLIEDG 311
             E D   +  S F   +G  V S  VTV+DD T+E   G    D EGV  +KT LI+DG
Sbjct: 269 GLEGDFNRKGSSAFSGLVGQQVASSLVTVVDDGTLENRRGSLSIDDEGVPTQKTVLIQDG 328

Query: 312 VLNGYLHSRETAGRLNMDVTGNARAEG-LNKPIVRMSNTYIKPGSWKFDELLEDTKTGIF 370
           +L GY+  +     +    TGN R E   + P+ RM+NTY++ G    +++++    GI+
Sbjct: 329 ILKGYMQDKLNGRLMGQASTGNGRRESYAHLPMPRMTNTYMEAGDSSPEDIIKSVDKGIY 388

Query: 371 LKGSRGGQVDTGKGLFQFNAVEAFLIEDGKLTKPLRDAGLSGEILDILHHIDAVSDEFEL 430
                GGQVD   G F F+A EA+LIE G++T+ ++ A L G   + +  +  V ++  L
Sbjct: 389 APNFGGGQVDITSGKFVFSASEAYLIEKGEITQAIKGATLIGNGPEAMGQLSMVGNDLAL 448

Query: 431 --SVGYCGKGGQSVPVGDGGGSVR 452
              VG CGK GQSVPVG G  S++
Sbjct: 449 DKGVGVCGKDGQSVPVGVGQPSLK 472