Pairwise Alignments

Query, 458 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 482 a.a., tldD protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  176 bits (447), Expect = 1e-48
 Identities = 129/443 (29%), Positives = 214/443 (48%), Gaps = 28/443 (6%)

Query: 23  YADLRIVTGESNNIIQKDGIIDEISSGISSGVIVRVLEKNGWGLATSNSVSLKNIEEIIK 82
           ++DL        + + +DGII + S  I  GV VR +     G A ++ ++   +   ++
Sbjct: 35  FSDLYFQGSRHESWVLEDGIIKDGSFHIERGVGVRAISGEKTGFAYADDITPAALTAAVE 94

Query: 83  KAQGMAKISNIHTKKSIELKEIPIIQDNTK---ADVKIHPENISIEEKKEYLKSAHENMS 139
            A+G+A        ++ + ++   + D+     A  ++   N+ ++E   +++S      
Sbjct: 95  AARGIASAGEQTQVQAFKRQKALALYDSLDPIAAMEEVKKINL-LKEADAFIRSLDS--- 150

Query: 140 GEKIVSTSVSYSDGEGHSILMTSEGTRIENESVKALLRMTA---IAKDGTLQFAFDRIGG 196
             +I+   VS +      ++  S+GT   +  ++ L+R      + ++G  +      GG
Sbjct: 151 --RIIQVVVSLAGVHEEILVAASDGTLAAD--IRPLVRFNCSVILEENGKRERG--GAGG 204

Query: 197 NGFEVIKNAKIEE---------MAKNTKERAVRLLTAESCPKGTFDVILDPELAGVFIHE 247
            G        + +          A+    +A   L A   P G   V+L     GV +HE
Sbjct: 205 GGRHDYSVLMVNDDTGLPMCFAFAREAVRQAQVNLNAIDAPAGEMTVVLGNGWPGVLLHE 264

Query: 248 AVGHAAEADLVLQNDSVFHDKLGNSVGSEEVTVIDDATIEKSFGQYKYDHEGVKGEKTTL 307
           AVGH  E D   +  S F   +G  V S+ VTV+DD T+    G    D EGV+ ++T L
Sbjct: 265 AVGHGLEGDFNRKGSSAFSGMVGQQVASKLVTVVDDGTLANRRGSLSIDDEGVQTQRTVL 324

Query: 308 IEDGVLNGYLHSRETAGRLNMDVTGNARAEG-LNKPIVRMSNTYIKPGSWKFDELLEDTK 366
           IEDG+L GYL  +  A  + +  TGN R E   + P+ RM+NTY+  G  +  ++++  K
Sbjct: 325 IEDGILKGYLQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMTSGESEPSDIIKSVK 384

Query: 367 TGIFLKGSRGGQVDTGKGLFQFNAVEAFLIEDGKLTKPLRDAGLSGEILDILHHIDAVSD 426
            GI+     GGQVD   G F F+A EA+LIE+G++T+ ++ A L G   + +  I  V +
Sbjct: 385 KGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQAIKGATLIGNGPEAMSQISMVGN 444

Query: 427 EFEL--SVGYCGKGGQSVPVGDG 447
           +  L   VG CGK GQSVPVG G
Sbjct: 445 DMALDKGVGVCGKDGQSVPVGVG 467