Pairwise Alignments

Query, 458 a.a., TldD/PmbA family protein from Methanococcus maripaludis S2

Subject, 447 a.a., pmba protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 78/372 (20%), Positives = 160/372 (43%), Gaps = 22/372 (5%)

Query: 65  GLATSNSVSLKNIEEIIKKAQGMAKISNIHTKKSIELKEIPIIQDNTKADVKIH-PENIS 123
           G ++++ +S + I   +K A  +A+ ++      +  K +   +     D+K++ P+ IS
Sbjct: 73  GSSSTSDLSPEAIALAVKAADDIARYTSADPFSGLADKALMATEIR---DLKLYYPQEIS 129

Query: 124 IEEKKEY-LKSAHENMSGEKIVSTSVSYSDGEGHSILMTSEGTRIENE--SVKALLRMTA 180
            +E  +  +++    +  +  ++ S   S     S+ +        N   S +  L  + 
Sbjct: 130 ADELAQLAIRAETAALDADPRINNSDGASANAHTSVKVYGNSHGFLNGYCSSRYSLSCSV 189

Query: 181 IAKD--GTLQFAFDRIGGNGFEVIKNAKIEEMAKNTKERAVRLLTAESCPKGTFDVILDP 238
           I +D  G +Q  +D      F  + +   E +   T E+ V  L A         ++L P
Sbjct: 190 IGEDRNGNMQRDYDYTIARKFNEMLSP--ESVGLKTAEKTVSRLGARKIATTRLPILLAP 247

Query: 239 ELAGVFIHEAVGHAAEADLVLQNDSVFHDKLGNSVGSEEVTVIDDATIEKSFGQYKYDHE 298
           E+A   I   +G A     + +  S   D +   +  +  ++ +   +  +     YD E
Sbjct: 248 EIATGLIGHLIG-AISGGSLYRKSSFLLDAIHTQIFPDWFSIEEQPHLLGALASANYDSE 306

Query: 299 GVKGEKTTLIEDGVLNGYLHSRETAGRLNMDVTGNARAEGLNKPIVRMSNTYIKPGSWKF 358
           GV  +   +I+ G+L  YL +  +A +L++  TG+A           + N  +      F
Sbjct: 307 GVATQDRRIIDRGMLETYLLTSYSARKLSLPNTGHAGG---------IYNWTLAHTGQGF 357

Query: 359 DELLEDTKTGIFLKGSRGGQVDTGKGLFQFNAVEAFLIEDGKLTKPLRDAGLSGEILDIL 418
           DEL++   TG+ +    G  V+   G +   A   F +E+G++  P+ +  ++G + D+ 
Sbjct: 358 DELVKGMGTGLIVTEVMGQGVNMVTGDYSRGAA-GFYVENGEVQFPVEEITIAGNLKDMF 416

Query: 419 HHIDAVSDEFEL 430
             I AVS +F+L
Sbjct: 417 RGIQAVSKDFDL 428