Pairwise Alignments

Query, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 868 a.a., MscS Mechanosensitive ion channel (NCBI) from Rhodospirillum rubrum S1H

 Score =  101 bits (252), Expect = 5e-26
 Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 13/259 (5%)

Query: 3   ISLMGYSMSINLILILKAILILVLGYFAVKIVSSI-LENGAKKSKIPELVSEFVIKLFSA 61
           IS++  ++ I + L+  AI  +  G    K++S   ++ G + S         +  +   
Sbjct: 563 ISIVDIAVGILVFLVAMAITRVAQGTLQRKVLSQTGMDAGVRHS---------LTAVLGY 613

Query: 62  ILYVFVILLAVGVFGVETGPIILGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDE 121
           I  V    LAVG  G++   I L ++ +L + +GFGLQ+ + N  SGL I V +P+   +
Sbjct: 614 IGLVAAAALAVGTMGIDLTNIAL-IAGALSVGIGFGLQNIVNNFVSGLIILVERPVKVGD 672

Query: 122 TVQIGGITGKIVEVGIMATKLLTPDNVVITIPNKLVWGSPITNYT-RMDLRRVDVAVGVS 180
            V IG   G +  +   AT+L T     + IPN  +  SP TN T R  L R+DV+V V 
Sbjct: 673 WVIIGSHEGLVKRISFRATELETFTQASVVIPNAEILSSPFTNLTLRNRLGRIDVSVLVI 732

Query: 181 YGENLDNALSKALELISEHPKVLKDPAPAVVVTGLGESSVDLQLRAWTKTGDYWG-VKGD 239
              +        LE+   HP+VL  PAP VV+    ++ ++ ++R++T      G +  D
Sbjct: 733 MNSDTRKVRDLLLEIARAHPQVLTLPAPWVVLKAFADTGLEFEVRSYTSNVMNRGTIASD 792

Query: 240 LTKGIYEKYGKEGIEIPFP 258
           +   I  ++ +EG+ +P P
Sbjct: 793 MRLEIDRRFREEGVIMPAP 811