Pairwise Alignments

Query, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 297 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 97.1 bits (240), Expect = 4e-25
 Identities = 63/261 (24%), Positives = 130/261 (49%), Gaps = 11/261 (4%)

Query: 11  SINLILILKAILILVLGYFAVKIVSSILENGAKKSKIPELVSEFVIKLFSAILYVFVI-L 69
           +I +  +L+  L+L+L +F V  +  ++    +++ +   V+   + LFS I  +  I +
Sbjct: 21  AITVSQVLQVPLLLLLAWFIVTRIGKLI----RRALLARKVAPDAVHLFSRIYLILAIAI 76

Query: 70  LAVGVFGVETGPI--ILGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDETVQIGG 127
           + V    +   PI     +S ++ + +GFG Q+ + N  SG  +   +P+   + ++IG 
Sbjct: 77  ILVTSLEILNIPIKAFAFVSGAVAIGVGFGAQNIINNFISGWILMWERPIRIGDFLEIGE 136

Query: 128 ITGKIVEVGIMATKLLTPDNVVITIPNKLVWGSPITNYTRMD-LRRVDVAVGVSYGENLD 186
             G +  +   +T +   D V + +PN  +  + +TN+T +D + R  V VGV+YG +++
Sbjct: 137 TKGVVESINTRSTLIRRNDGVHMLVPNSQLLENTVTNWTLIDNIARSTVRVGVAYGSDVE 196

Query: 187 NALSKALELISEHPKVLKDPAPAVVVTGLGESSVDLQLRAW---TKTGDYWGVKGDLTKG 243
                  + + EH ++L  P+P  +    G++++      W       D   ++ D+   
Sbjct: 197 RVADIIKQTLDEHEEILTTPSPVAIFEDFGDNALIFDGIFWVCANTEADIRRIRSDIRFR 256

Query: 244 IYEKYGKEGIEIPFPQMDIHV 264
           IY+ + + GI I FPQ D+H+
Sbjct: 257 IYKLFTQAGIVIAFPQRDLHL 277