Pairwise Alignments

Query, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 274 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  169 bits (427), Expect = 8e-47
 Identities = 84/248 (33%), Positives = 141/248 (56%), Gaps = 1/248 (0%)

Query: 17  ILKAILILVLGYFAVKIVSSILENGAKKSKIPELVSEFVIKLFSAILYVFVILLAVGVFG 76
           ++ AI+I ++G +   +   +      K KI + V  FV  +  A+++VF ++  +G  G
Sbjct: 22  VVFAIIIFIIGKYLANVAKKLTTKLMNKRKIDKTVVSFVANMAWALVFVFTVIATLGQIG 81

Query: 77  VETGPIILGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDETVQIGGITGKIVEVG 136
           V+T  ++  + A+ GL +G  LQ +L+N  SG+ + + +P    + ++  GI G + E+ 
Sbjct: 82  VQTASLVAVIGAA-GLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIAGTVDEIT 140

Query: 137 IMATKLLTPDNVVITIPNKLVWGSPITNYTRMDLRRVDVAVGVSYGENLDNALSKALELI 196
           I +TKL TPDN VI  PN  +    ITNY+ M+ RR+D+ +GVSY  +L        +++
Sbjct: 141 IFSTKLRTPDNKVIVAPNSSIMNGTITNYSAMETRRIDLVIGVSYDADLKQTKEVLKQVL 200

Query: 197 SEHPKVLKDPAPAVVVTGLGESSVDLQLRAWTKTGDYWGVKGDLTKGIYEKYGKEGIEIP 256
             +  +LKDPA  V +T L +SSV+  +R W K  DYW  + ++ + I     +  I IP
Sbjct: 201 DNNAYILKDPAYTVALTELADSSVNFVVRPWVKGSDYWPARFEILEQIKLALDENNIGIP 260

Query: 257 FPQMDIHV 264
           +PQMDI+V
Sbjct: 261 YPQMDIYV 268