Pairwise Alignments

Query, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 429 a.a., hypothetical small-conductance mechanosensitive channel (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 3/128 (2%)

Query: 22  LILVLGYFAVKIVSSILENGAKKSKI--PELVSEFVIKLFSAILYVFVILLAVGVFGVET 79
           LIL +     K+V  I+ N    SK+   +L+ +F   L    ++   +L+A+   G+E 
Sbjct: 302 LILFVASLVGKLVKKIVSNTVSNSKLNFSKLLQDFFTSLSGKAVFTIGLLIALSQLGIEL 361

Query: 80  GPIILGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDETVQIGGITGKIVEVGIMA 139
           GP++ G   + G+I+GF LQDTL+N  SG+ I + +P D  + +   G++G++  + +++
Sbjct: 362 GPLLAGFGIA-GVIIGFALQDTLSNFASGMMILIYRPYDVGDLINAAGVSGRVSHMSLVS 420

Query: 140 TKLLTPDN 147
           T + T DN
Sbjct: 421 TTIKTLDN 428