Pairwise Alignments

Query, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 1067 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.0 bits (245), Expect = 4e-25
 Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 4/214 (1%)

Query: 54   FVIKLFSAILYVFV-ILLAVGVFGVETGPIILGLSASLGLILGFGLQDTLTNLTSGLWIA 112
            F I   S  L VF+ +L+     G+E   +   L A+L L LGFGLQ+   N  SGL I 
Sbjct: 841  FAITTVSRYLVVFLGLLIGFSNLGMEWSKL-QWLIAALSLGLGFGLQEIFANFISGLIIL 899

Query: 113  VMKPLDKDETVQIGGITGKIVEVGIMATKLLTPDNVVITIPNKLVWGSPITNYTRMD-LR 171
              KP+   +TV I  +TG + ++ I AT ++  D   I IPNK      + N++  D + 
Sbjct: 900  FEKPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDPIT 959

Query: 172  RVDVAVGVSYGENLDNALSKALELISEHPKVLKDPAPAVVVTGLGESSVDLQLRAWTK-T 230
            RV V V V+   +     +   + + E    L +P P V   G G+ + D ++RA+ K  
Sbjct: 960  RVIVHVSVARDSDPAKVEATLYQAVQECEDALANPEPEVWFAGFGKHTQDYEVRAYAKDM 1019

Query: 231  GDYWGVKGDLTKGIYEKYGKEGIEIPFPQMDIHV 264
               W ++ DL K I  K  +  +E+ +PQM+IH+
Sbjct: 1020 SARWPLRHDLHKRITRKLKENNLELAYPQMEIHL 1053