Pairwise Alignments

Query, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 278 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

 Score =  117 bits (293), Expect = 3e-31
 Identities = 72/251 (28%), Positives = 127/251 (50%), Gaps = 5/251 (1%)

Query: 17  ILKAILILVLGYFAVKIVSSILENGAKKSKIPELVSEFVIKLFSAILYVFVILLAVGVFG 76
           +L A L+ +LG +    VS ++    +K +I   +S FV  L   ++ V V ++A+G  G
Sbjct: 31  LLGAALVFLLGLWVASKVSRLVAKQCEKHQIDITLSNFVSNLVRILIIVMVAIIALGKIG 90

Query: 77  VETGPIILGL-SASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDETVQIGGITGKIVEV 135
           +   P++  + +ASLG   G  LQ  L+N  +G+ I V +P     T++I G +G +  +
Sbjct: 91  ISVTPMVAAIGAASLGA--GLALQGMLSNYAAGVTIIVTRPFVVGNTIEIKGESGVVTRI 148

Query: 136 GIMATKLLTPDNVVITIPNKLVWGSPITNYTRMDLRRVDVAVGVSYGENLDNALSKALEL 195
            +  T L   +   I+IPNK + G  + N     L  V+    +SY  + + A+S   EL
Sbjct: 149 NLGMTILTNEEGEQISIPNKHIVGEILHNSFSNKL--VETQFNLSYNNDPEAAISLITEL 206

Query: 196 ISEHPKVLKDPAPAVVVTGLGESSVDLQLRAWTKTGDYWGVKGDLTKGIYEKYGKEGIEI 255
           +S++P V +D  P + + G     +++ +R W  T  Y+  K  +   IY    + GIE+
Sbjct: 207 LSQNPNVSQDTTPNIGINGFNAIGIEIGVRYWVPTQSYFQHKYKINLAIYNALKQAGIEM 266

Query: 256 PFPQMDIHVHK 266
             P  +IH+ +
Sbjct: 267 ACPVREIHLQE 277