Pairwise Alignments

Query, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 551 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

 Score =  190 bits (482), Expect = 7e-53
 Identities = 90/247 (36%), Positives = 147/247 (59%), Gaps = 3/247 (1%)

Query: 22  LILVLGYFAVKIVSSILENGAKKSKI--PELVSEFVIKLFSAILYVFVILLAVGVFGVET 79
           +IL +   A K+   I+ N    SK+   +L+ +F   L    ++   +L+A+   G+E 
Sbjct: 303 MILFVASLAGKLAKKIVSNTVSNSKLNFSKLLQDFFTSLSGKAVFTIGVLIALSQLGIEL 362

Query: 80  GPIILGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDETVQIGGITGKIVEVGIMA 139
           GP++ G   + G+I+GF LQD+L+N  SG+ I + +P D  + +   G+TG++  + +++
Sbjct: 363 GPLLAGFGIA-GVIIGFALQDSLSNFASGMMILIYRPYDVGDLISAAGVTGRVSHMSLVS 421

Query: 140 TKLLTPDNVVITIPNKLVWGSPITNYTRMDLRRVDVAVGVSYGENLDNALSKALELISEH 199
           T + T DN  + IPN  +WG  I N T    RRVD+  G+ YG+N+++A +    ++  H
Sbjct: 422 TTIKTLDNQRLIIPNNKIWGDTINNITAEHQRRVDMTFGIGYGDNIEHAEAVLKSIVEAH 481

Query: 200 PKVLKDPAPAVVVTGLGESSVDLQLRAWTKTGDYWGVKGDLTKGIYEKYGKEGIEIPFPQ 259
           PKV K PAP + +  LGESSVD  +R W K  DYW V  D+T+ +  ++  EGI IPFPQ
Sbjct: 482 PKVQKIPAPLIKLHVLGESSVDFIVRPWAKPEDYWDVYWDITREVKMRFDAEGISIPFPQ 541

Query: 260 MDIHVHK 266
            D+H+++
Sbjct: 542 RDVHIYQ 548